PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026428208.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 238aa    MW: 26857.9 Da    PI: 6.9324
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026428208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000124163123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_026428208.1 41 YTCSFCRREFRSAQALGGHMNVH 63
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MAFISNNINS NKIKETWGYN RSYSCGKETL GSKFSWPPRP YTCSFCRREF RSAQALGGHM  60
NVHRRDRARL NQSIPWVDMN QYQHANFIIP NPSFPPSSST TAFTNHHFPP AYPPTIAYFL  120
PSSTTPPSIT ACSSSTPPPS TDENIRIKSS STIFISSSSF RQSSSTKGST TFPMMEMSLE  180
IGDQHQLEDL MNENYNHHQY CGSNNNMKID GENLRLDLEI GMCSEDDLDL ELRLGFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.14e-20C2H2 family protein