PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427927.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 247aa    MW: 28464.2 Da    PI: 7.6061
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.71e-1963144288
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                     +Y +YAk++GF  +k++skk   ng+  + tf+C +egk+++ +++   +   ++  +tgCkakl+ ++e d+kw+++ l+leHnH+
  XP_026427927.1  63 CYGRYAKRMGFLCKKRSSKKD--NGQLRHVTFTCIREGKKKRVTDA---SVVLNPPFKTGCKAKLTARLEPDNKWRISVLVLEHNHQ 144
                     799*********999998887..999**************998777...88999********************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDVSESENVE LRESHDGLNE KSDKGGKEII EVVDDDVTID EEGEIAVPKI GMEFDTVEEI  60
YECYGRYAKR MGFLCKKRSS KKDNGQLRHV TFTCIREGKK KRVTDASVVL NPPFKTGCKA  120
KLTARLEPDN KWRISVLVLE HNHQNIPIAA RYWRYNKVIN NPVKRKHLRN DKEGTRVHEL  180
YHTIAVEDIP EIVSEQSPQG MFSLNRCDIG EAQFYKFDND KSHEKFHSGQ ILNCTRNGLN  240
HVLHQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.13e-16FAR1 family protein