PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026427926.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 323aa MW: 37502.9 Da PI: 8.0494 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 62 | 1.7e-19 | 63 | 144 | 2 | 88 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +Y +YAk++GF +k++skk ng+ + tf+C +egk+++ +++ + ++ +tgCkakl+ ++e d+kw+++ l+leHnH+ XP_026427926.1 63 CYGRYAKRMGFLCKKRSSKKD--NGQLRHVTFTCIREGKKKRVTDA---SVVLNPPFKTGCKAKLTARLEPDNKWRISVLVLEHNHQ 144 799*********999998887..999**************998777...88999********************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 323 aa Download sequence |
MDVSESENVE LRESHDGLNE KSDKGGKEII EVVDDDVTID EEGEIAVPKI GMEFDTVEEI 60 YECYGRYAKR MGFLCKKRSS KKDNGQLRHV TFTCIREGKK KRVTDASVVL NPPFKTGCKA 120 KLTARLEPDN KWRISVLVLE HNHQNIPIAA RYWRYNKVIN NPVKRKHLRN DKEGTRVHEL 180 YHTIAVEDIP EIVSEQSPQG MFSLNRCDIG EAQFYKFDND KSHEKFHSGQ VWASCCKLDD 240 MPKYYVELTR VELFPDFKLY AKWLEPCAPP REVIKWLDEK MQECQSINKA CMKSIQRKER 300 YGRCTGISTL TGRVMTSRIV NVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G76320.2 | 6e-16 | FAR1 family protein |