PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427373.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 218aa    MW: 23931 Da    PI: 5.2138
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260132.71.5e-41281271100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+C+++Cvlapyfp ++p kf  +h++FGasn++k+l++lpe++r da+ss+vyeA+ r+rdPvyG++g+i +l++q++ l+a+la
  XP_026427373.1  28 PCAACKILRRRCVEKCVLAPYFPPAEPLKFTTAHRVFGASNIIKMLQELPESQRVDAVSSMVYEANSRIRDPVYGCAGTICQLHKQVSDLQAQLA 122
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     + ++e
  XP_026427373.1 123 KSQAE 127
                     99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MGSSTETSIA TTISNSSPPS PPQVIVSPCA ACKILRRRCV EKCVLAPYFP PAEPLKFTTA  60
HRVFGASNII KMLQELPESQ RVDAVSSMVY EANSRIRDPV YGCAGTICQL HKQVSDLQAQ  120
LAKSQAEVVN MRCQQAHIVG LLCMEMKQHS QYQQQQQQQQ PTTSNISPTS SLSSLQMQQD  180
VDDFLFNTIT TDSSSPDNSF DGLISGDGNL GSEWESLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.14e-61LBD family protein