PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427218.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 645aa MW: 73456.3 Da PI: 6.5828

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	95.8	4e-30	150	235	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++++++++++k+plW+ev++ m +e+g++rs k+C+ek+enl k+ykk+keg+++r ++ +++++f+qlea XP_026427218.1 150 RWPRQETLTLLEIRSSLDNKFKEANQKGPLWDEVARIMaEEHGYQRSGKKCREKFENLYKYYKKTKEGKSGR--QDGKNYRFFRQLEA 235 8***********************************999*************************97..66678*****85 PP
2	trihelix	60.2	5.1e-19	469	556	1	86
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 rW ++e+l Li +r+ me+r+r+ g +k lWe++s+km++ g++rs++ C+ekw +nk+ k + +++ ++ s+++ pyf++l+ XP_026427218.1 469 RWLEDEILNLIHLRTGMESRFRQcGYPEKSLWEDISSKMASLGYNRSAEICEEKWLTVNKYITKANVASNSTyKECSRNEGPYFQHLD 556 8*******************9789********************************999988888745666678899997 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MEMEDEYGIA DLRQMIAGRS SFPAMNQQQS ELVQFNRNLA AASTGVMPTR LGHEHYQEML 60 MFGGGGVHHH RVGVADHLHH NQNLCGGGGM MEFCAANDDS TTTTNSTTSN ITINPNNSGV 120 CVLEMMEGNV KGAVNNGVAG GGDNGGGNSR WPRQETLTLL EIRSSLDNKF KEANQKGPLW 180 DEVARIMAEE HGYQRSGKKC REKFENLYKY YKKTKEGKSG RQDGKNYRFF RQLEALYGET 240 TNSHQLSVSV SNTNFDGDIA GLSFQFMNNN SASTHSNQEG LLSHSHQTKF SDQSLSLSNS 300 SDFDTSSSED NNDEDITTFS FMENGENKNK LVKDNRCSKR GKKNWKAKIR DFVDSRMKKL 360 METQEAWLDK VLKTLEHKEQ ERILREEEWR RQETARLDQE HKFWAKEHAR FEARDAVIME 420 AFQRMVGNEL KVSSPDQELI ATNFHEATEN KNHNRTQAFR KIIVNGHNRW LEDEILNLIH 480 LRTGMESRFR QCGYPEKSLW EDISSKMASL GYNRSAEICE EKWLTVNKYI TKANVASNST 540 YKECSRNEGP YFQHLDSMHH NDYQGAFPKQ DTYKQGPETE GVQLNDVPSP SNSTAGMSTA 600 VQDSSFRFMM THNDQGDNSW QNYGVKLYNK GSNQISKFIS PLEEI

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MEMEDEYGIA DLRQMIAGRS SFPAMNQQQS ELVQFNRNLA AASTGVMPTR LGHEHYQEML  60
MFGGGGVHHH RVGVADHLHH NQNLCGGGGM MEFCAANDDS TTTTNSTTSN ITINPNNSGV  120
CVLEMMEGNV KGAVNNGVAG GGDNGGGNSR WPRQETLTLL EIRSSLDNKF KEANQKGPLW  180
DEVARIMAEE HGYQRSGKKC REKFENLYKY YKKTKEGKSG RQDGKNYRFF RQLEALYGET  240
TNSHQLSVSV SNTNFDGDIA GLSFQFMNNN SASTHSNQEG LLSHSHQTKF SDQSLSLSNS  300
SDFDTSSSED NNDEDITTFS FMENGENKNK LVKDNRCSKR GKKNWKAKIR DFVDSRMKKL  360
METQEAWLDK VLKTLEHKEQ ERILREEEWR RQETARLDQE HKFWAKEHAR FEARDAVIME  420
AFQRMVGNEL KVSSPDQELI ATNFHEATEN KNHNRTQAFR KIIVNGHNRW LEDEILNLIH  480
LRTGMESRFR QCGYPEKSLW EDISSKMASL GYNRSAEICE EKWLTVNKYI TKANVASNST  540
YKECSRNEGP YFQHLDSMHH NDYQGAFPKQ DTYKQGPETE GVQLNDVPSP SNSTAGMSTA  600
VQDSSFRFMM THNDQGDNSW QNYGVKLYNK GSNQISKFIS PLEEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	8e-84	Trihelix family protein