PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026427102.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 284aa    MW: 30256.9 Da    PI: 4.6264
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026427102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.00027260282223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+k F + s L+ H +  H
  XP_026427102.1 260 SCNSCSKAFGTDSALQAHSKAkH 282
                     6*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEFWGVEVKP GQSYKVAPVE EKVLHLSQSC IGEVKKGKEE TVVVYAKIDN QKHVIAHLSA  60
DKFPQISHDL VFEKEFELSH SSKNGSIYFT GYMSVLGDSD DEGGFLTDSD EDDMPVEDFP  120
VDIKENGKAA KPDASAPKKV KVVDPKADDE DDSDESDSDG SDSDEDEDME GSDSDDGESS  180
DEEEEPTPTP KGKKRPAEGA NKKSTPGDKK AKLETPQKSG ADGKKGGAVH QGTPYPKGGK  240
TPASGGNKSN KSLKSTGSVS CNSCSKAFGT DSALQAHSKA KHGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.22e-21C2H2 family protein