PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026426977.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 831aa MW: 94630.5 Da PI: 5.8872

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026426977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.8	9.9e-20	123	210	1	91
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYneYA+++GF+vr+++++ + + ++i ++ +vCs+eg+ + +k r++r+++r gC a +++k+ + +k+ ++++++eH+Hel+p XP_026426977.1 123 DFYNEYARKIGFRVRIQRTNMNkAQRNRIHRQVLVCSCEGTYKMIRKP----RKRRETKRFGCLAAFEIKLITGDKYALIRFSSEHTHELVP 210 6*************99988833445588999*****998877....999*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 831 aa Download sequence
MEPESENPNT DVDTTTCTIN IDNITDNESL EDNKNNSGTV PESVSSDSSG EESPSNVVVQ 60 PSEDPIAEDP TPIVTDDAVQ VGPKLASNDN GKSTEVDQIY RVYDELIEPE VGMIFDSAEE 120 AFDFYNEYAR KIGFRVRIQR TNMNKAQRNR IHRQVLVCSC EGTYKMIRKP RKRRETKRFG 180 CLAAFEIKLI TGDKYALIRF SSEHTHELVP PKFSHYLKAP RKLGFAQIGM TDKTQPPGTR 240 PLELTLPEVA GVSDQNSLEQ KTPAGFSIKG DAEFLLGYLK QKKQENKHFF YSFRTNEDGK 300 ICGVFFCDAK SRRDYGLFGD SVCFDTTFKT NNFDMVCVPV VGLSNHGLPI LFGCGLLDGE 360 TTDAVAWLFM TFLEAMGGKK PVSVFTDHSA AISNAAGLVF PESHHGLCLW HIFLNASKQL 420 TKVVKASKTF APQFKAWIYD QETVEEFDHS WNKLLEDFDL RDNEWLQGLY ELREKWAQVY 480 SLGHFSAAMT TSERCENICK FLKAFFSNGS ILLRDFLDQY SKAMADRYEK EREAEKKTQL 540 TTPNWISGWS VEREASKVYT REIFYGFQDA LQKTIDLSLE LEKDDGTIRT YRATELEGQK 600 TIHSLVHNIS EQSVSCTCRK FEFDGILCPH ALKLFRDLQY KSLPPRYYLK RWTRKVTDED 660 VFDPSGELIL SNNDPTSTVR SRYDDLTHIS QSIVAKGLKS DEMFTLIKSL LQEVKSKADA 720 HITSKDERRV AIQKRLPNPH QNLVSNLNEE ATQDVFGMMQ QQPDYSQNGW QWMNRQAIHA 780 QGIHPQGIHP QDIIPGYNFA GSQQQRQFHP NELFMSQQGS SSQIPPPEMP H

Sequence ? help Back to Top

Protein Sequence Length: 831 aa Download sequence

MEPESENPNT DVDTTTCTIN IDNITDNESL EDNKNNSGTV PESVSSDSSG EESPSNVVVQ  60
PSEDPIAEDP TPIVTDDAVQ VGPKLASNDN GKSTEVDQIY RVYDELIEPE VGMIFDSAEE  120
AFDFYNEYAR KIGFRVRIQR TNMNKAQRNR IHRQVLVCSC EGTYKMIRKP RKRRETKRFG  180
CLAAFEIKLI TGDKYALIRF SSEHTHELVP PKFSHYLKAP RKLGFAQIGM TDKTQPPGTR  240
PLELTLPEVA GVSDQNSLEQ KTPAGFSIKG DAEFLLGYLK QKKQENKHFF YSFRTNEDGK  300
ICGVFFCDAK SRRDYGLFGD SVCFDTTFKT NNFDMVCVPV VGLSNHGLPI LFGCGLLDGE  360
TTDAVAWLFM TFLEAMGGKK PVSVFTDHSA AISNAAGLVF PESHHGLCLW HIFLNASKQL  420
TKVVKASKTF APQFKAWIYD QETVEEFDHS WNKLLEDFDL RDNEWLQGLY ELREKWAQVY  480
SLGHFSAAMT TSERCENICK FLKAFFSNGS ILLRDFLDQY SKAMADRYEK EREAEKKTQL  540
TTPNWISGWS VEREASKVYT REIFYGFQDA LQKTIDLSLE LEKDDGTIRT YRATELEGQK  600
TIHSLVHNIS EQSVSCTCRK FEFDGILCPH ALKLFRDLQY KSLPPRYYLK RWTRKVTDED  660
VFDPSGELIL SNNDPTSTVR SRYDDLTHIS QSIVAKGLKS DEMFTLIKSL LQEVKSKADA  720
HITSKDERRV AIQKRLPNPH QNLVSNLNEE ATQDVFGMMQ QQPDYSQNGW QWMNRQAIHA  780
QGIHPQGIHP QDIIPGYNFA GSQQQRQFHP NELFMSQQGS SSQIPPPEMP H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	168	175	RKPRKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-119	FAR1 family protein