PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026426565.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 405aa    MW: 45210.5 Da    PI: 9.7552
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026426565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012165188123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++Cp Cg+ F  + + ++H++  H
  XP_026426565.1 165 FPCPTCGEIFQKPQLVEQHQSIkH 188
                     89******************9888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MSTSSSPIKS FTTFFSSLLV LLLFHLGCFF FVTDNHDHDH QLQNSSSNKK QKINPYFSPL  60
SSYSARKSSN NNNKPRKSLS SSWCFIKKIF TFRKHVNHDR TISPSSLSTS ASVTTQPRPP  120
TRNAVLSKSP TRKRRTPWSS SIAMSLDSEF SLIDHRSFPL RNDIFPCPTC GEIFQKPQLV  180
EQHQSIKHAV TELHDDDSSK NIVTIIFKTG WNSPIKNPPT IDRILKIHNS SKILSRFEEY  240
REVVKSKESR RSGGNRRRDE RCIADGNELL RFHCSTFICN LGQNGKSSIC SQQYCNVCGI  300
IRSGFSPKMD GISTVSSSSR AHVSFPEELE KEFAFMNIKR VMLVCRVIAG RIGEAGGGGG  360
ILEKGELAGF DSVLGGGCGG AIDEEELLVF NPRAVLPCFA IIYNV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131136TRKRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.14e-80C2H2 family protein