PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026426078.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 473aa MW: 52182.1 Da PI: 8.1046

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026426078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.1	2.3e-13	96	191	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...........rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 +W + + +L++a++++ ++l+rg l++ +Wee+++ + +g +s +qCk+k +n++kryk + ++++ + ++p+f++ XP_026426078.1 96 EWNDLSIECLLNAYTDKFHKLNRGILRGRDWEEIAAIVtrhnkssessqNGGGGAKSVEQCKNKVDNMKKRYKVELQRMNAC-GTIICQWPWFEK 189 5999*****************************************9888899***************998888874.567789***9 PP trihelix 85 le 86 +e XP_026426078.1 190 IE 191 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MASEEDFVLL PDEANPRKFS FFFSVNREER GQNSQTEKRN RIEEEEEEEP SNGIQREVRN 60 ETPLYKKTRS NTTPSTIHSV PVGGYYKPDN RKDREEWNDL SIECLLNAYT DKFHKLNRGI 120 LRGRDWEEIA AIVTRHNKSS ESSQNGGGGA KSVEQCKNKV DNMKKRYKVE LQRMNACGTI 180 ICQWPWFEKI EHISTNLPAA VSSPKPIRQS NRFQVCSPPS AGVGLIQLAN PRWKRVVFKV 240 SGASLVGEGP HKTDPKVTLL IAREVARACS LGVEVAIVLG GRNFFCGDTW VAATGLERST 300 AYQLGMLAAV MNSVLLRSAL EALNVRTRVQ SAFPMQQVTE PYNKRKAIRH LEKGRVVIFG 360 GVGAGTGNPL FTADTAAALR ASEINAEAVL KGTNVDGVHD CHSEDSSSGA FKHISYRELI 420 STGVTSIDMM AVSFCEENGI PVVLFNLHEP GNISKALCGE QVGTLIDQSG TIS

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MASEEDFVLL PDEANPRKFS FFFSVNREER GQNSQTEKRN RIEEEEEEEP SNGIQREVRN  60
ETPLYKKTRS NTTPSTIHSV PVGGYYKPDN RKDREEWNDL SIECLLNAYT DKFHKLNRGI  120
LRGRDWEEIA AIVTRHNKSS ESSQNGGGGA KSVEQCKNKV DNMKKRYKVE LQRMNACGTI  180
ICQWPWFEKI EHISTNLPAA VSSPKPIRQS NRFQVCSPPS AGVGLIQLAN PRWKRVVFKV  240
SGASLVGEGP HKTDPKVTLL IAREVARACS LGVEVAIVLG GRNFFCGDTW VAATGLERST  300
AYQLGMLAAV MNSVLLRSAL EALNVRTRVQ SAFPMQQVTE PYNKRKAIRH LEKGRVVIFG  360
GVGAGTGNPL FTADTAAALR ASEINAEAVL KGTNVDGVHD CHSEDSSSGA FKHISYRELI  420
STGVTSIDMM AVSFCEENGI PVVLFNLHEP GNISKALCGE QVGTLIDQSG TIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-160	Trihelix family protein