PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026426031.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 813aa MW: 93356.2 Da PI: 6.6557

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026426031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.1	1.6e-19	94	181	1	91
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++YneYA+++GF+vr+ +++ + ++ ++i ++ +vCs+eg+ + +k r++r+++r +C a +++k+++ +k+ +++++ eH+Hel p XP_026426031.1 94 DYYNEYARKIGFRVRILRTNMNrSKRDKIHRQVLVCSCEGTYRMVRKP----RKRRESKRFECMAVFEIKLMSGDKYALIRFKAEHTHELIP 181 69***********87766553445559999******998877....999********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 813 aa Download sequence
MDSQSENPNN NIIVSSSLPC TLNGDPDIYE TDDEGDPIPE ETPVTDDNCE TIPDLDSNDN 60 ENTAEVVEKR FCDSDELVEP KVGMIFDTAK EAFDYYNEYA RKIGFRVRIL RTNMNRSKRD 120 KIHRQVLVCS CEGTYRMVRK PRKRRESKRF ECMAVFEIKL MSGDKYALIR FKAEHTHELI 180 PPKFSSYLKT PKRIESAHIA HVDSSPPRGI KAADVFSYIP EEVSLSDPNT KSGFFKRGDA 240 HFLLEYFRKK KQENKHFFYS FRTNGDGNIC GVFFCDAKSR RDYGLFGDAV SFDTTFKTNN 300 YDMICAPVIG INNHGQPMLF GCGLLDVETT DSVVWLFTTF LEAMGGKKPI SVFTDQSAFI 360 SNAVSVVFPE AQHGLCLWHI LQNASKHLTK VFKAFKSFSV QFRACIYDPE TIEEFEESWS 420 KLLDEYGLRG IEWLQGLYDL RQMWAQVYSS GHFCAGMTAT ERSENISKFL KAYFSTGSIL 480 LREFVDQYSK AMVDRYEKEK EAEKKTHQTA PNLISAWSVE REASNLYTRE MFYGFQEGLQ 540 QTIDLLLELV SDDGVIRTYR ATEMEGQKKI RTLTYNQAEQ SVYCSCRKFE FNGILCSHAL 600 KLFRDLRFKN LPPKYYLKRW TRKATEEDVF DPSGELIPND NDPSSTARHN ALLQISQRIV 660 TKGSKSEEVF SLTNALLLEL EAKMEGRNTR EESRPTAKKT TIDTNQNQVS YLAPTQIIRG 720 GRTSAVQKTT TDTNQNQEAS RLLQVQQPQP NYSQTGWQWM NQRVVHPQGV HPRDILPPYN 780 SVPSQQRRPY LQNSLFAPQQ ESPSQIEPRE MPG

Sequence ? help Back to Top

Protein Sequence Length: 813 aa Download sequence

MDSQSENPNN NIIVSSSLPC TLNGDPDIYE TDDEGDPIPE ETPVTDDNCE TIPDLDSNDN  60
ENTAEVVEKR FCDSDELVEP KVGMIFDTAK EAFDYYNEYA RKIGFRVRIL RTNMNRSKRD  120
KIHRQVLVCS CEGTYRMVRK PRKRRESKRF ECMAVFEIKL MSGDKYALIR FKAEHTHELI  180
PPKFSSYLKT PKRIESAHIA HVDSSPPRGI KAADVFSYIP EEVSLSDPNT KSGFFKRGDA  240
HFLLEYFRKK KQENKHFFYS FRTNGDGNIC GVFFCDAKSR RDYGLFGDAV SFDTTFKTNN  300
YDMICAPVIG INNHGQPMLF GCGLLDVETT DSVVWLFTTF LEAMGGKKPI SVFTDQSAFI  360
SNAVSVVFPE AQHGLCLWHI LQNASKHLTK VFKAFKSFSV QFRACIYDPE TIEEFEESWS  420
KLLDEYGLRG IEWLQGLYDL RQMWAQVYSS GHFCAGMTAT ERSENISKFL KAYFSTGSIL  480
LREFVDQYSK AMVDRYEKEK EAEKKTHQTA PNLISAWSVE REASNLYTRE MFYGFQEGLQ  540
QTIDLLLELV SDDGVIRTYR ATEMEGQKKI RTLTYNQAEQ SVYCSCRKFE FNGILCSHAL  600
KLFRDLRFKN LPPKYYLKRW TRKATEEDVF DPSGELIPND NDPSSTARHN ALLQISQRIV  660
TKGSKSEEVF SLTNALLLEL EAKMEGRNTR EESRPTAKKT TIDTNQNQVS YLAPTQIIRG  720
GRTSAVQKTT TDTNQNQEAS RLLQVQQPQP NYSQTGWQWM NQRVVHPQGV HPRDILPPYN  780
SVPSQQRRPY LQNSLFAPQQ ESPSQIEPRE MPG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	146	RKPRKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-122	FAR1 family protein