PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026425000.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 294aa    MW: 33599.8 Da    PI: 9.3345
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026425000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.35.8e-1937131190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fY++Y+++ G  +rk++s+ +k+ + + +  fvCs+eg ++++ +     + +++r++++ rt+Cka++ +  +   ++w+++++ +eHnH ++
  XP_026425000.1  37 EFYKAYGRNNGSMTRKRSSYATKKGEGVSRVVFVCSNEGIHNKDFDPdeegNYRKKRNTSTMRTDCKAMICIAFDGrFQVWYINEFIEEHNHVMV 131
                     6**************************************99987665666788999999**************99989**************886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDNMVEANGK TNYNGKSSED SKPLVGMEFA SIEDVKEFYK AYGRNNGSMT RKRSSYATKK  60
GEGVSRVVFV CSNEGIHNKD FDPDEEGNYR KKRNTSTMRT DCKAMICIAF DGRFQVWYIN  120
EFIEEHNHVM VSPKKRMLMR SNKHMPHEAK SLAEAFNKSR IPVGKVAALF GQSESIGFDT  180
RDVYNHLRNV RKSLLDVGDA EALVSCFRRK TLENPSFYYA FQVDDEGRAA NVFWVHARSR  240
IAYSRFGDAV SFDSTYKTNK YSMPFAPFTG TNHHRQSVTF GFALLGDETK ETYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-46FAR1 family protein