PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424473.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 273aa MW: 29489.3 Da PI: 6.6194

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424473.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48	2.1e-15	28	88	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ XP_026424473.1 28 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgAVGDANVFYWFQNRRSRSRR 88 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.7	7.1e-35	27	90	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q XP_026424473.1 27 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQ 90 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MEDQAPDHNN NNHNNHPSQG SNKSEPVRSR WTPKPEQILI LESIFNSGMV NPPKDETVRI 60 RKLLEKFGAV GDANVFYWFQ NRRSRSRRRQ RQIQAGLLND SSNIRASNGL SIHYEPTSSS 120 SSSSCSSSSS TSSSSSNSSS PACFANPSFS HPFLIGSSSS SSSSCGGGGI GDNGCVDDLF 180 SFSQQMGLSE IDQSSILCSS STTNLHFQTG FITVFINGVP TEVPNGPLDM KSMFGQDAML 240 VHSSGVAVPF NEYGFSLQSL QTGESYFLVS RSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	2e-36	WOX family protein