PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026424463.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 247aa MW: 28074.7 Da PI: 9.8209 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19 | 3.7e-06 | 91 | 113 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H XP_026424463.1 91 FVCEVCDKGFQREQNLQLHRRGH 113 89*******************88 PP | |||||||
2 | zf-C2H2 | 10.6 | 0.0017 | 201 | 219 | 5 | 23 |
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsrk+n+ +H + XP_026424463.1 201 DCGTHFSRKDNFITHKAFC 219 9**************8765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MFPETFSNST SLSGEVSAGS SHGNYNTATR LQDLSPILFS YFDTDHHHHE QKQQSEEITK 60 MRKKKNRPGN PDPDAEVVAL SPKTITATNR FVCEVCDKGF QREQNLQLHR RGHNLPWKLK 120 QTSNNTDVMR KKKRVYVCPE VSCIYHQPSR ALGDLTGIKK HFLRKHGEKN WKSELCSKKY 180 AVQSDWKART KRCGTKEHRC DCGTHFSRKD NFITHKAFCD AFADESAGLV SSSSASNLGK 240 YAIVTPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55110.1 | 5e-94 | C2H2 family protein |