PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424400.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 419aa MW: 44119.7 Da PI: 9.363

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	137.4	4.2e-43	106	183	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls++k y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+q+ XP_026424400.1 106 RCQVEGCKLDLSDIKAYYSRHKVCAMHSKSPKVIVAGLEQRFCQQCSRFHQLAEFDQGKRSCRRRLAGHNERRRKPQP 183 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MDIVGSGSNN NFGVSSSSSS SKGGGGGGAG AGGGAGVTAV SSDSSSLNGL KFGKKIYFED 60 VGIGVSAKSV AGSTSICVPD GIPLSPPTPA TSRNRRNVVQ GGKPPRCQVE GCKLDLSDIK 120 AYYSRHKVCA MHSKSPKVIV AGLEQRFCQQ CSRFHQLAEF DQGKRSCRRR LAGHNERRRK 180 PQPGSLLSSR YGRLSASLQD SSRGGGFVMD FAAYPRMSGR DGWTTSRTSA DQPSATGKFL 240 ALQYPPANVF YQGSHTYMQG SSAAGGSVFS SSRIPPGECF AGVSDSGCAL SLLSNQSWDP 300 RNNQASSSVS VNNLMNGEGA PMVSQSTAPN QGAVSNSYTV SSWALKGNDE GGGRGNSHEL 360 HHHDLGLGQV TSQPMNANHQ FSGGELELAH HAVENRQYME LAHSRAYDTS SVQQMHWSL

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MDIVGSGSNN NFGVSSSSSS SKGGGGGGAG AGGGAGVTAV SSDSSSLNGL KFGKKIYFED  60
VGIGVSAKSV AGSTSICVPD GIPLSPPTPA TSRNRRNVVQ GGKPPRCQVE GCKLDLSDIK  120
AYYSRHKVCA MHSKSPKVIV AGLEQRFCQQ CSRFHQLAEF DQGKRSCRRR LAGHNERRRK  180
PQPGSLLSSR YGRLSASLQD SSRGGGFVMD FAAYPRMSGR DGWTTSRTSA DQPSATGKFL  240
ALQYPPANVF YQGSHTYMQG SSAAGGSVFS SSRIPPGECF AGVSDSGCAL SLLSNQSWDP  300
RNNQASSSVS VNNLMNGEGA PMVSQSTAPN QGAVSNSYTV SSWALKGNDE GGGRGNSHEL  360
HHHDLGLGQV TSQPMNANHQ FSGGELELAH HAVENRQYME LAHSRAYDTS SVQQMHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57920.1	9e-55	SBP family protein