PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026424399.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 420aa MW: 44248.9 Da PI: 9.2172

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026424399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	137.4	4.2e-43	106	183	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls++k y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+q+ XP_026424399.1 106 RCQVEGCKLDLSDIKAYYSRHKVCAMHSKSPKVIVAGLEQRFCQQCSRFHQLAEFDQGKRSCRRRLAGHNERRRKPQP 183 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MDIVGSGSNN NFGVSSSSSS SKGGGGGGAG AGGGAGVTAV SSDSSSLNGL KFGKKIYFED 60 VGIGVSAKSV AGSTSICVPD GIPLSPPTPA TSRNRRNVVQ GGKPPRCQVE GCKLDLSDIK 120 AYYSRHKVCA MHSKSPKVIV AGLEQRFCQQ CSRFHQLAEF DQGKRSCRRR LAGHNERRRK 180 PQPGSLLSSR YGRLSASLQE DSSRGGGFVM DFAAYPRMSG RDGWTTSRTS ADQPSATGKF 240 LALQYPPANV FYQGSHTYMQ GSSAAGGSVF SSSRIPPGEC FAGVSDSGCA LSLLSNQSWD 300 PRNNQASSSV SVNNLMNGEG APMVSQSTAP NQGAVSNSYT VSSWALKGND EGGGRGNSHE 360 LHHHDLGLGQ VTSQPMNANH QFSGGELELA HHAVENRQYM ELAHSRAYDT SSVQQMHWSL

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MDIVGSGSNN NFGVSSSSSS SKGGGGGGAG AGGGAGVTAV SSDSSSLNGL KFGKKIYFED  60
VGIGVSAKSV AGSTSICVPD GIPLSPPTPA TSRNRRNVVQ GGKPPRCQVE GCKLDLSDIK  120
AYYSRHKVCA MHSKSPKVIV AGLEQRFCQQ CSRFHQLAEF DQGKRSCRRR LAGHNERRRK  180
PQPGSLLSSR YGRLSASLQE DSSRGGGFVM DFAAYPRMSG RDGWTTSRTS ADQPSATGKF  240
LALQYPPANV FYQGSHTYMQ GSSAAGGSVF SSSRIPPGEC FAGVSDSGCA LSLLSNQSWD  300
PRNNQASSSV SVNNLMNGEG APMVSQSTAP NQGAVSNSYT VSSWALKGND EGGGRGNSHE  360
LHHHDLGLGQ VTSQPMNANH QFSGGELELA HHAVENRQYM ELAHSRAYDT SSVQQMHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	1e-53	SBP family protein