PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026423773.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 596aa MW: 68470.2 Da PI: 8.9811

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026423773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.4	2e-07	49	130	15	89
FAR1 15 rkskskkskrngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++ +++++ +g++ + ++ C + g +++kkk + +++r++ + ++gC +lk + +kw+v HnHel XP_026423773.1 49 VVISKSRKPVQGRVARLELGCERGGVYRNHKKKtdtptlkDLTKKRESGTRKCGCPFTLKGVWMAGDKWKVRVHCGAHNHEL 130 4445555568899**********9998888889999877777888888999999999999999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MEASMVKNMD TRGKKVDLTQ CFVSDQVFDS RDALIEWCQE VGRKNMSVVV ISKSRKPVQG 60 RVARLELGCE RGGVYRNHKK KTDTPTLKDL TKKRESGTRK CGCPFTLKGV WMAGDKWKVR 120 VHCGAHNHEL PEKLVGHSYV ARLKKKEKQI LVDLTKSGAR PRQVLSTLKQ RSKKNMSMRE 180 IYNARATLKL MEIEGKSAMQ QILGLLSKHH YAEWHRRDKE TDVLKDIFWA HPESLQLALG 240 SHSVLMVDCT YKTNRFGSLL LRIVGVTSTG KSFTVAFIFM EAETEDHYTW ALTRLKRLFS 300 PNTLPSIFVT DGEIVLVNAI STVFPQAEWL LCSSHVLKNV SKNCKQFFES DDEFEIVMKE 360 WTNLTQVRTK DEYAEAFCDF VLTWTSYPGC IQYLRDTWLR HKERFFLAWT KFIKHFGNTA 420 INRVGSYHAK LKSQLGSSAS TFSTCWTTMH QMICNELMDI KASFEKSLIS VPHEYLLPAF 480 KELGGYVSHR AMELLLWEHN RSEEVGLDVG VCGCVLPLSY GLPCAHEIVQ YCRNSTGIPL 540 SEIDPQWKLL SAIPVPEEHS EFDYLPQLIL VRERWEKASK SERELMQKKL SEIGCF

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MEASMVKNMD TRGKKVDLTQ CFVSDQVFDS RDALIEWCQE VGRKNMSVVV ISKSRKPVQG  60
RVARLELGCE RGGVYRNHKK KTDTPTLKDL TKKRESGTRK CGCPFTLKGV WMAGDKWKVR  120
VHCGAHNHEL PEKLVGHSYV ARLKKKEKQI LVDLTKSGAR PRQVLSTLKQ RSKKNMSMRE  180
IYNARATLKL MEIEGKSAMQ QILGLLSKHH YAEWHRRDKE TDVLKDIFWA HPESLQLALG  240
SHSVLMVDCT YKTNRFGSLL LRIVGVTSTG KSFTVAFIFM EAETEDHYTW ALTRLKRLFS  300
PNTLPSIFVT DGEIVLVNAI STVFPQAEWL LCSSHVLKNV SKNCKQFFES DDEFEIVMKE  360
WTNLTQVRTK DEYAEAFCDF VLTWTSYPGC IQYLRDTWLR HKERFFLAWT KFIKHFGNTA  420
INRVGSYHAK LKSQLGSSAS TFSTCWTTMH QMICNELMDI KASFEKSLIS VPHEYLLPAF  480
KELGGYVSHR AMELLLWEHN RSEEVGLDVG VCGCVLPLSY GLPCAHEIVQ YCRNSTGIPL  540
SEIDPQWKLL SAIPVPEEHS EFDYLPQLIL VRERWEKASK SERELMQKKL SEIGCF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-15	FAR1 family protein