PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026423605.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

E2F/DP

Protein Properties

Length: 368aa MW: 41204.1 Da PI: 8.6422

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026423605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	64.1	2e-20	29	94	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f +l+ + + ++ln++a++L v +rRR YD++NV+ea++++ kk k ++ wkg XP_026423605.1 29 RKQKSLGLLCSNFFNLYDDDDVEFLNLNDAANRL---GV--ERRRMYDVVNVFEAIGVLVKKGKAQYYWKG 94 79**************9999********.....****************************98 PP
2	E2F_TDP	63.7	2.6e-20	168	251	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse..........dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r++ksLr+lt++f+kll +s+ ++v l+++ak L+++ d k+RR+YDi+NVL++++liek + +++++w g XP_026423605.1 168 RTGKSLRQLTEEFVKLLLSSDGKVVALDQAAKILLTDannssetrcnDS--KVRRLYDIANVLSSVGLIEKthylnSGRPAFKWLG 251 689**************999*****************997544..9*****************999999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MKYQIQNQMN ESSTEEKKDC SNEEQSYNRK QKSLGLLCSN FFNLYDDDDV EFLNLNDAAN 60 RLGVERRRMY DVVNVFEAIG VLVKKGKAQY YWKGLGGIAN ALKEMKEEAL NDSFNISCDD 120 DGTETLVDQQ TGSSSQENLN ANSRVEALAA GSSLAKCSSS SSKNGGTRTG KSLRQLTEEF 180 VKLLLSSDGK VVALDQAAKI LLTDANNSSE TRCNDSKVRR LYDIANVLSS VGLIEKTHYL 240 NSGRPAFKWL GRQKETLPVS KKRIFGTDLT NMSIKRNKTV SSMNLNLNSH NQEQDRYDLA 300 HRHNPFGFDP TKLPNADAIV KKTVTRSQAM LNLASTHIPP YRNQGLQGLF AHYTEAWGTW 360 YDEIGKKP

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MKYQIQNQMN ESSTEEKKDC SNEEQSYNRK QKSLGLLCSN FFNLYDDDDV EFLNLNDAAN  60
RLGVERRRMY DVVNVFEAIG VLVKKGKAQY YWKGLGGIAN ALKEMKEEAL NDSFNISCDD  120
DGTETLVDQQ TGSSSQENLN ANSRVEALAA GSSLAKCSSS SSKNGGTRTG KSLRQLTEEF  180
VKLLLSSDGK VVALDQAAKI LLTDANNSSE TRCNDSKVRR LYDIANVLSS VGLIEKTHYL  240
NSGRPAFKWL GRQKETLPVS KKRIFGTDLT NMSIKRNKTV SSMNLNLNSH NQEQDRYDLA  300
HRHNPFGFDP TKLPNADAIV KKTVTRSQAM LNLASTHIPP YRNQGLQGLF AHYTEAWGTW  360
YDEIGKKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-77	E2F/DP family protein