PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026423079.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 559aa MW: 63231.2 Da PI: 7.4067

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026423079.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	22.2	3.9e-07	171	261	1	84
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhk.lFGasnvlkllkalpeeer.....edamsslvyeAeara.rdPvyGavgvilklq 84 +C aC +l r+C+ +C +a+ f + + +f++v + F ++n+ ++ ++e ++ +++ ++e ++r+ + P yGa+g++ +l XP_026423079.1 171 RCTACIYLARNCSVSCWFAQFFQPNFSGDFEAVCRsQFERRNLAYNTRTSRQELTsaeitQIQATTRLFEHRIRTvSFPDYGATGIVISLV 261 6*******************88888888887652688888876665554443333333777888899999996268****9998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MDTHQLCLVC KYWRIYPWTQ PQPGFSHEQH HRMFRADDIG ATVRYYSTIP FYVPPNTDMN 60 YRRRVRDSTR RFEDVIRSHD DVYGITGIII LLESLYYVNS ARQEGLMIGA LYYGLPAAEH 120 IRLDYPVRPR QQTPSFSNSL VSSTSAQQSQ QTPSFSNSLV STSAQQSQHQ RCTACIYLAR 180 NCSVSCWFAQ FFQPNFSGDF EAVCRSQFER RNLAYNTRTS RQELTSAEIT QIQATTRLFE 240 HRIRTVSFPD YGATGIVISL VILLRAVNTC VDFLEDISDD RVQQLVEQYH SPQVPRYPAP 300 SNVNTGSQQQ QYQQFYRGAK RLLEQGGPQI HQQRPQQRPR LQGPSNQPAG PCPRPYQRAG 360 PWPQLQQPEI PLLEPALPQP RLQQPVRFPH HPTPFQQPYS PAAFQQPPYQ VQMQGFQTRP 420 LPQSQESAVP SQFQHLFAGT NSSSSAISSQ SQFQSQQQHY FSTGNSSSAA VVGQPHSSAS 480 SILNSSSTAA TEFLPAPSVL DDNNWRESSA VVGEPHYPAS SNPNSSWTAA NESLPAPSLP 540 DDVDWWNFEL DQLLKGPSD

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MDTHQLCLVC KYWRIYPWTQ PQPGFSHEQH HRMFRADDIG ATVRYYSTIP FYVPPNTDMN  60
YRRRVRDSTR RFEDVIRSHD DVYGITGIII LLESLYYVNS ARQEGLMIGA LYYGLPAAEH  120
IRLDYPVRPR QQTPSFSNSL VSSTSAQQSQ QTPSFSNSLV STSAQQSQHQ RCTACIYLAR  180
NCSVSCWFAQ FFQPNFSGDF EAVCRSQFER RNLAYNTRTS RQELTSAEIT QIQATTRLFE  240
HRIRTVSFPD YGATGIVISL VILLRAVNTC VDFLEDISDD RVQQLVEQYH SPQVPRYPAP  300
SNVNTGSQQQ QYQQFYRGAK RLLEQGGPQI HQQRPQQRPR LQGPSNQPAG PCPRPYQRAG  360
PWPQLQQPEI PLLEPALPQP RLQQPVRFPH HPTPFQQPYS PAAFQQPPYQ VQMQGFQTRP  420
LPQSQESAVP SQFQHLFAGT NSSSSAISSQ SQFQSQQQHY FSTGNSSSAA VVGQPHSSAS  480
SILNSSSTAA TEFLPAPSVL DDNNWRESSA VVGEPHYPAS SNPNSSWTAA NESLPAPSLP  540
DDVDWWNFEL DQLLKGPSD