PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422970.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Dof

Protein Properties

Length: 361aa MW: 39980.6 Da PI: 8.5489

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122	2.1e-38	65	125	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ +lkcprCds+ntkfCyynnysl+qPr+fCkaC+ryWt+GG+lrnvPvGgg rknk+++ XP_026422970.1 65 QQPHLKCPRCDSSNTKFCYYNNYSLTQPRHFCKACKRYWTRGGTLRNVPVGGGYRKNKRVK 125 56789*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MLCSSNNNSE KMIISSSTTT NTTTNEWSQR DESTGILMAP NGNNNNRVME KTATQEQHQQ 60 QQQQQQPHLK CPRCDSSNTK FCYYNNYSLT QPRHFCKACK RYWTRGGTLR NVPVGGGYRK 120 NKRVKRPATA SSNDTASSNL TTTTNSAAHH HISSNPNQMM SPLFYGLPTN QSSYMNLSFP 180 GCDQHHQSQL SSLGLSYPSI AAMANNNQSH EDYGVGGGYN RTTQVQDLIN SSSNSLSSFS 240 LFGSSSPSSR TSALMMFNGT NKESRNNGTT YHQGLLPFQD LQMGMNDDNS RMSRKEVKNE 300 DGNNNHSNNE NGNNKIEWNN LPCQSQVGAA DSSLFWNSNM TSTFGTWPDL ANYGSSVTSL 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MLCSSNNNSE KMIISSSTTT NTTTNEWSQR DESTGILMAP NGNNNNRVME KTATQEQHQQ  60
QQQQQQPHLK CPRCDSSNTK FCYYNNYSLT QPRHFCKACK RYWTRGGTLR NVPVGGGYRK  120
NKRVKRPATA SSNDTASSNL TTTTNSAAHH HISSNPNQMM SPLFYGLPTN QSSYMNLSFP  180
GCDQHHQSQL SSLGLSYPSI AAMANNNQSH EDYGVGGGYN RTTQVQDLIN SSSNSLSSFS  240
LFGSSSPSSR TSALMMFNGT NKESRNNGTT YHQGLLPFQD LQMGMNDDNS RMSRKEVKNE  300
DGNNNHSNNE NGNNKIEWNN LPCQSQVGAA DSSLFWNSNM TSTFGTWPDL ANYGSSVTSL  360
I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	9e-38	Dof family protein