PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422710.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 456aa MW: 49183.4 Da PI: 6.3059

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.6	7.7e-37	98	243	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_026422710.1 98 PPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTISAPsqfmrna 192 789*****************************************************************999977777777777444445556666 PP TCP 89 ...................................kaaksaakskksqksaasalnlak 112 +s+++++s ln+a+ XP_026422710.1 193 yfnqsfltpqlrmrsewernidesssqrqnlfaggG--------FSSENPSSSLLNFAA 243 666666666666666666666666665333333330........333333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MDGDSGNIRW PNFPLQLLEK KEEYQEEEED DEDEDNNNNN NNNSNLCSSR SGGYNPSLSI 60 SAEATTSNTM IGSNSGGNLL TTTTDHDSNQ LPLVKKPPPK RTSTKDRHTK VDGRGRRIRM 120 PAACAARVFQ LTKELGHKSD GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS 180 TISAPSQFMR NAYFNQSFLT PQLRMRSEWE RNIDESSSQR QNLFAGGGFS SENPSSSLLN 240 FAAASNMMNP NLLHAKQEFH EMSSNTADHQ GNIERKNVIS TSITSQQQQQ QQQHQMGSYL 300 STNHGQQIPA AAAFWMVSNP NNSNNQVMNT SDNPPPMWPF PSSVSNSNAT HGGGSMSTST 360 NSGLHFMNFA TPLALSPSQQ LGLGMGLRSG GVTAEGHLGM LAALNAYSQA PVHGSGGSGA 420 GGSDDPQTSG FHSQHHHHGA GNDHDQQQHD TSSHHS

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MDGDSGNIRW PNFPLQLLEK KEEYQEEEED DEDEDNNNNN NNNSNLCSSR SGGYNPSLSI  60
SAEATTSNTM IGSNSGGNLL TTTTDHDSNQ LPLVKKPPPK RTSTKDRHTK VDGRGRRIRM  120
PAACAARVFQ LTKELGHKSD GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS  180
TISAPSQFMR NAYFNQSFLT PQLRMRSEWE RNIDESSSQR QNLFAGGGFS SENPSSSLLN  240
FAAASNMMNP NLLHAKQEFH EMSSNTADHQ GNIERKNVIS TSITSQQQQQ QQQHQMGSYL  300
STNHGQQIPA AAAFWMVSNP NNSNNQVMNT SDNPPPMWPF PSSVSNSNAT HGGGSMSTST  360
NSGLHFMNFA TPLALSPSQQ LGLGMGLRSG GVTAEGHLGM LAALNAYSQA PVHGSGGSGA  420
GGSDDPQTSG FHSQHHHHGA GNDHDQQQHD TSSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	5e-48	TCP family protein