PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422684.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 290aa MW: 33307.1 Da PI: 6.5144

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422684.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.9	9.2e-25	80	167	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+Y++ +GFs+rksk+ + +++++t+r f+Cskeg+r ++ + + r+r++trtgCka+l +++++dgk+ ++++++eHnH lap XP_026422684.1 80 DYYNAYGRFLGFSIRKSKMVIR-KDKTVTRRVFCCSKEGFRCKHPRG--DPMRPRPVTRTGCKARLGIQLQDDGKYSINEFVEEHNHVLAP 167 69*************98887.7777***********99988..999*********************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MDSQGKESLH DHNETSEQSG EQLDSEGENE MQEEEILDLE LQTGVDNPLP SAVQSQNAKV 60 FSGDAPAVGM VFDSENQAYD YYNAYGRFLG FSIRKSKMVI RKDKTVTRRV FCCSKEGFRC 120 KHPRGDPMRP RPVTRTGCKA RLGIQLQDDG KYSINEFVEE HNHVLAPPSE AHMLRSQRKS 180 QDPQTGSIES ILSLIREEAG ESPNANQGDC SNYVQRWCYE TLKRAEEDKK RIRELSAELH 240 RERRQCAAYR EKLHMVLKDM EDHTVHLSKQ VENVVDNMKD VESRRSKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-35	FAR1 family protein