PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026422460.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 336aa MW: 37367.5 Da PI: 10.0615

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026422460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.2	3.4e-16	30	113	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v +L++a++ ++ +r+klk+++We+v++++ +++ ++++qCk+k+e+++kry+ + ++ s++p+f++l+ XP_026422460.1 30 EWSEGAVSCLLDAYETKWVLRNRAKLKGHDWEDVARHVssraNSTKAPKTQTQCKNKIESMKKRYRSESSSNDP------SSWPLFQRLD 113 5***********************************98888888999**************9999996......57***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MEKEEANSSK PVVSSITSGL GGGDRLKRDE WSEGAVSCLL DAYETKWVLR NRAKLKGHDW 60 EDVARHVSSR ANSTKAPKTQ TQCKNKIESM KKRYRSESSS NDPSSWPLFQ RLDLLLRCRT 120 ATTTSPTDNC PTSSTTATAT ILNAPLLLLD PPPAAPQPPP PPPPPLVVPI HSLPHPNIGG 180 SFLDSHESND AVREASKEDD LRAKKIVENG SAKTSMETGS TSGSTPVSET IKEKLKMKEI 240 KLEKNKKKRN KRRRGRGEEW EVAESIRWLA EVVMRSEQAR METMKEVEKM RMEAEAKKGE 300 MDLKRTEIMA NTQLQIAKIL ASNGKDIDSS LRIGRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	252	NKKKRNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	6e-48	Trihelix family protein