PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026421808.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 297aa MW: 32497.2 Da PI: 6.2985 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00024 | 97 | 119 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_026421808.1 97 FSCNYCQRKFYSSQALGGHQNAH 119 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MEEPSVSSSI SPLYGLDNSE KEEYRNQEEE KGIDLNKGFS SGFSIESEIE YHNQELNLID 60 NFNVDSSSTS SSTGKNDKEE ESREEQEVDA EEEPRVFSCN YCQRKFYSSQ ALGGHQNAHK 120 RERTIAKRDR HLGEAAAAAF TYANMHHHLH NNNPYNHHQY QFSSMGSLPL YGSRSLGVQV 180 HSMIHKPTSP SSSLPSLLPS SSFGHPQHLY GQNHPGWTAS SSFRPSIGDH QPTIGRLPSF 240 VSGSMPRVPR FNNYEGGVGG SFLLQGGGGS DGGGGRSSTA SNQGGGDFKS IDLALKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80730.1 | 3e-29 | C2H2 family protein |