PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026421629.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 644aa MW: 74465.8 Da PI: 7.1955

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026421629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.1	2.9e-18	46	131	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +f+++Y++++GF v+k+++kks +g tf+C + gk e+++++ + +++++gCk kl+ ++ ++kw++++++leHnH l+p XP_026421629.1 46 EFFRSYGYHMGFPVKKRTTKKS-IDGILRYVTFTCGRAGKGESSSNN----LVKPPTSQVGCKVKLTASLCGENKWRINTVNLEHNHGLCP 131 69*************99998.9999************9988....77889999****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 644 aa Download sequence
MDEETSNKET TGVVGDAEVV IDEKRESEII EPKVGTMFNS VDEIYEFFRS YGYHMGFPVK 60 KRTTKKSIDG ILRYVTFTCG RAGKGESSSN NLVKPPTSQV GCKVKLTASL CGENKWRINT 120 VNLEHNHGLC PSQAAYFRCN WQFGKNNKMN PEGGSDRGVN ENVLNVEREC RRCSGTMTRL 180 QLGEGDAFAM QEFFMKMQTR SKDFFYSMDL DEDGRLRNVF WADGRSREAY KEFGEVVYLD 240 TSFLANKYNI QLTSLVGVNH HGNLTLFGCG LVSSDDTGTY VWLFRTWMEC MSNCAPKGII 300 TDQDTAIKIA VEVVFPTIRH RWCLYRVMKK MPEILGELYD SISSSLQEVV YDTQSPTEFE 360 QSWNELVEKH GLRHDEWLTG LYNGRDRWVP CFVKSNFWAG ISATKRDDSI NLFFDGFVNS 420 KTTLKKFFVE QYDKALKSEV EKESQLDFRS FAKTVPCITT YEMEKQVQRV YTISKFKEFQ 480 KELTGKMYCD VISIQEGSMV SEYHIREDIV IGEAKKRMMF TISFQRNDCE VNCSCLMFQF 540 GGILCRHAIY VLIRNDIMLL PDSYILSRWR KDVRRYYTRV KINDSWSATP EQLQYDELCL 600 AFAKLAHWVA GDRESCRHVL EWINNQKTTL ATKRLSCESN PAQK

Sequence ? help Back to Top

Protein Sequence Length: 644 aa Download sequence

MDEETSNKET TGVVGDAEVV IDEKRESEII EPKVGTMFNS VDEIYEFFRS YGYHMGFPVK  60
KRTTKKSIDG ILRYVTFTCG RAGKGESSSN NLVKPPTSQV GCKVKLTASL CGENKWRINT  120
VNLEHNHGLC PSQAAYFRCN WQFGKNNKMN PEGGSDRGVN ENVLNVEREC RRCSGTMTRL  180
QLGEGDAFAM QEFFMKMQTR SKDFFYSMDL DEDGRLRNVF WADGRSREAY KEFGEVVYLD  240
TSFLANKYNI QLTSLVGVNH HGNLTLFGCG LVSSDDTGTY VWLFRTWMEC MSNCAPKGII  300
TDQDTAIKIA VEVVFPTIRH RWCLYRVMKK MPEILGELYD SISSSLQEVV YDTQSPTEFE  360
QSWNELVEKH GLRHDEWLTG LYNGRDRWVP CFVKSNFWAG ISATKRDDSI NLFFDGFVNS  420
KTTLKKFFVE QYDKALKSEV EKESQLDFRS FAKTVPCITT YEMEKQVQRV YTISKFKEFQ  480
KELTGKMYCD VISIQEGSMV SEYHIREDIV IGEAKKRMMF TISFQRNDCE VNCSCLMFQF  540
GGILCRHAIY VLIRNDIMLL PDSYILSRWR KDVRRYYTRV KINDSWSATP EQLQYDELCL  600
AFAKLAHWVA GDRESCRHVL EWINNQKTTL ATKRLSCESN PAQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-100	FAR1 family protein