PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026421099.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARR-B
Protein Properties Length: 728aa    MW: 80447.2 Da    PI: 5.8604
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026421099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.23.8e-28230283155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  XP_026421099.1 230 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVDRLTRENVASHLQKYRL 283
                     79*******************.********************************8 PP
2Myb_DNA-binding37.94.2e-12232282148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+  ++t++++ s++qky+
   XP_026421099.1 232 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvDRLTRENVASHLQKYR 282
                      678***********************************************7 PP
3Response_reg76.69.3e-26461541109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+ + +++l+++l++ +y +v++++++  al++l+e++  +Dl++ D++mp+mdG++ll+     e++lp+i+++a+g+   + + +  G
  XP_026421099.1  46 VLAVDDDLICLRVLESLLRRCQY-HVTTTTQAVTALKMLRENRdkFDLVISDVQMPDMDGFKLLELVGL-EMDLPVIMLSANGDTRNVMRGITHG 138
                     799********************.***************999889*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_026421099.1 139 ACDYLLKPVRIEELKN 154
                     *************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
MELTNPLLTI ITQKMTVEEE FVRRRSSSIL CEDEQKNDLF PIGMRVLAVD DDLICLRVLE  60
SLLRRCQYHV TTTTQAVTAL KMLRENRDKF DLVISDVQMP DMDGFKLLEL VGLEMDLPVI  120
MLSANGDTRN VMRGITHGAC DYLLKPVRIE ELKNIWQHVL RKKKVDPKDQ NNLDNSDKLD  180
SGMGDSGKGP ENFGNDDRTK LNRKRKDQNE EDDDECDDDD ENDDPSSQKK PRVVWSVELH  240
RKFVAAVNQL GIDKAVPKKI LDLMNVDRLT RENVASHLQK YRLYLKRISC VASQQANMVA  300
ALGGKDASYL RMGSLDGLGD FHGFAGPGQL SNGSLASYSS AGMLGRLNAS LGLGLRGPSS  360
GMMQLGRPQN LTNSVHDLGK LHQNGNFLQG MPMSLELDQL QKSKSISRIG EFSSSIDSTA  420
FSGPSNFSET GVTIGNSNNS FLNVHSNSLL LQGVPQQTQN RVGFGDQSSR RMPSVNSESF  480
EFEFGASSHL PDQSGCNDNW PSAAPFNCFP SNPLPLGDNP FCHLDLSSGS LRENMSSINP  540
SIGSNSFDVS SNSVTTLHES RRDLQAGPIG VNVQHDKFSN FVNLGDDVGQ SMNLVPKQKW  600
ISHKQDYSQN SNLLFSSSNP SVPIHGVVGA LGQNKNTMSN RKTDFISTSR PNSGSTPHLT  660
RQNGIEKLSI DMTENFFLDQ NKSHGGVVSN SCDSLEDLMS AMIKREQDEL TSRDRDIGCD  720
IFPVRTCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-128ARR-B family protein