PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026420633.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 192aa MW: 22252.2 Da PI: 10.6727 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 89.3 | 5e-28 | 41 | 137 | 2 | 99 |
DUF260 2 CaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 CaaCk++r+kC++ C+lapyfp ++ ++f nv+++FG++n l+ll+++++ + ++a+++l+ eA++r + P G +gv +l +qle + ae +l XP_026420633.1 41 CAACKHQRKKCPPTCPLAPYFPRDKLSDFLNVREVFGVRNFLRLLEKANPWQ-QEAARTLIREADVRNKYPAVGMCGVSERLYRQLEGVTAERDL 134 ***********************************************87765.6789**********************************9988 PP DUF260 97 lke 99 l+e XP_026420633.1 135 LRE 137 775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MVMENLHPDI TAQILSRVPQ KSVSSCKRRK RFKFTRSRQG CAACKHQRKK CPPTCPLAPY 60 FPRDKLSDFL NVREVFGVRN FLRLLEKANP WQQEAARTLI READVRNKYP AVGMCGVSER 120 LYRQLEGVTA ERDLLREREI LIARESTLED LNIKFVAEKL VFPGELIRTF ATVVLAFVPI 180 GLLRSLYIRK TF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 3e-21 | LBD family protein |