PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026420430.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 281aa MW: 30870.9 Da PI: 8.4998

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026420430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00068	208	230	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C Fs+ L++H ++ H XP_026420430.1 208 ECPQCRAKFSTVTALVQHVQKtH 230 5******************9988 PP
2	zf-C2H2	17.1	1.5e-05	246	268	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C++ F+++ L++H + H XP_026420430.1 246 VCPKCSRGFRDPVALVNHVEKdH 268 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MGTPEFPDLG KHCTVEDCKL IDFLPFTCDR CNQVYCLEHR SFVKHQCPNA NKQDVTVVIC 60 PLCAKGVRLI PDEDPNITWE THVNTECDPS NYEKATKKKK CPVPRCKENL TFSNTIKCRD 120 CTIEHCLKHR FGPDHQCPGP KKATSGFPFV NLLNKSQKDG TRLSRNSSST SSSPTWVTGL 180 MNAASSVKAS FKTATDGIGQ SSSGQTEECP QCRAKFSTVT ALVQHVQKTH ERGNRSGGAN 240 KVTIDVCPKC SRGFRDPVAL VNHVEKDHGG TSRAGNSTTI N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-122	C2H2 family protein