PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026419853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 260aa MW: 29208.4 Da PI: 10.1026 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 72.8 | 2.9e-23 | 17 | 65 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 krie + rqvtfskRr g++KKA+ELS+LC+ae+a+i+fs+ gk + + XP_026419853.1 17 KRIEKEDARQVTFSKRRGGVFKKAHELSTLCGAEIAIIVFSPAGKPFSF 65 79******************************************96655 PP | |||||||
2 | K-box | 13.7 | 2.6e-06 | 116 | 166 | 25 | 75 |
K-box 25 kkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellle 75 + + ++++++++ ++++++L + eL+qL ++e+ k+ ++ +elll+ XP_026419853.1 116 AELKKIMKENKKQFWWDNIDDLGVHELEQLSAAIEDLKIKVADRADELLLT 166 45556789***************************9999999998888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MAATRKPSMG RQKIEIKRIE KEDARQVTFS KRRGGVFKKA HELSTLCGAE IAIIVFSPAG 60 KPFSFTHPHN MIHRYLSGNS HPTPLVTAHR EAKIRELNRE YTEALGRLEA EKKRGAELKK 120 IMKENKKQFW WDNIDDLGVH ELEQLSAAIE DLKIKVADRA DELLLTSYLP GKNPGTSSSG 180 TSQSENSSTI TFETKPTIIP NHQQIHTSSL PQHGYGADFG FVWTQRALLS IRSALCSDFI 240 ISMHTVLLHG RKPSLYGSHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60440.1 | 6e-37 | M-type_MADS family protein |