PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026419586.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 686aa MW: 79562.9 Da PI: 9.3416

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026419586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.5	3.5e-26	14	101	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YA++vGFsvrk+ +k+k +++i+ rtf Cs+eg+re++++ + ++r +trtgC a++++k +++++++v ++ +HnHela XP_026419586.1 14 EFYNVYARSVGFSVRKRWASKRKVDKKIIGRTFFCSCEGQREKHTRG--TPTKPRGVTRTGCMARMQIKINDNENYYVVEFLDDHNHELA 101 6****************************************9988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MIGKIFKSED DAYEFYNVYA RSVGFSVRKR WASKRKVDKK IIGRTFFCSC EGQREKHTRG 60 TPTKPRGVTR TGCMARMQIK INDNENYYVV EFLDDHNHEL ASSDKVHFLR SQRKILPAQA 120 TLINNMISSG FGATRIFSYM SEEAGGPQNL NFTQEDCTNL VQGKRIEWMK AGDAQLLLDY 180 FQAKQKENKS FFYTIQPDEE DRIMNIFWCD AKSRLDYSAF GDVVCFDTTF KTNGYDFPFA 240 PIVGVNNHGQ TILFGSALLK DESTRSFVWF FETFLTVMEG KEMKTIFTDQ ASQIANAIKQ 300 VFPNAHHRLC LWHIFQNVAK HLSHIFGIHE SFLSDFRKCI YDYETEYEFL SSWEQLLEKY 360 ELKDNKWLNK LFKLREKWAQ VYGREHFCAG MTTTQRSESI NNYFKKYFKK KQILREFVGQ 420 FDKAVAARRE KAKKADYKSM ATKPNLTSVW EVEEKSSKIY TSKIFNEFQM QVKRLIDLEF 480 KIDSDDVTTS IYKVSSYIGK RAPRTVRITS STLTFQCSSK KFEFFGILCA HILKVLRHLK 540 ISDLPSEYYL KRWTKDASNG IVIDSQGNSL MVDCDPSLSA RYSELSHLAL SIATTGCINE 600 EASIFVKQAL LRVLEETKSL STAQPNNVGV DREKNLLEIS DEDEDLPQGN TTLKDPIRKK 660 TIGSLLRDIK ILWRWGKGER RGKKEK

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MIGKIFKSED DAYEFYNVYA RSVGFSVRKR WASKRKVDKK IIGRTFFCSC EGQREKHTRG  60
TPTKPRGVTR TGCMARMQIK INDNENYYVV EFLDDHNHEL ASSDKVHFLR SQRKILPAQA  120
TLINNMISSG FGATRIFSYM SEEAGGPQNL NFTQEDCTNL VQGKRIEWMK AGDAQLLLDY  180
FQAKQKENKS FFYTIQPDEE DRIMNIFWCD AKSRLDYSAF GDVVCFDTTF KTNGYDFPFA  240
PIVGVNNHGQ TILFGSALLK DESTRSFVWF FETFLTVMEG KEMKTIFTDQ ASQIANAIKQ  300
VFPNAHHRLC LWHIFQNVAK HLSHIFGIHE SFLSDFRKCI YDYETEYEFL SSWEQLLEKY  360
ELKDNKWLNK LFKLREKWAQ VYGREHFCAG MTTTQRSESI NNYFKKYFKK KQILREFVGQ  420
FDKAVAARRE KAKKADYKSM ATKPNLTSVW EVEEKSSKIY TSKIFNEFQM QVKRLIDLEF  480
KIDSDDVTTS IYKVSSYIGK RAPRTVRITS STLTFQCSSK KFEFFGILCA HILKVLRHLK  540
ISDLPSEYYL KRWTKDASNG IVIDSQGNSL MVDCDPSLSA RYSELSHLAL SIATTGCINE  600
EASIFVKQAL LRVLEETKSL STAQPNNVGV DREKNLLEIS DEDEDLPQGN TTLKDPIRKK  660
TIGSLLRDIK ILWRWGKGER RGKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-136	FAR1 family protein