PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026419451.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 809aa MW: 93603.7 Da PI: 6.7142

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026419451.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46.1	1.6e-14	46	129	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY++YA +GF ++++skk +g + t++C ++g++++++++ + ++ +++Ckakl + + kw++t ++ eH+H XP_026419451.1 46 EFYRKYAAATGFGCKTRSSKKD--KGILRHVTYTCVRNGNHKTTSTT---PFELDPTGKCECKAKLSAILGVNLKWRITVFVPEHTHMT 129 6***********99998887..8999********9998877...8889999****************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MDNDVGSKEN DFGLVETPNE DGRNRKCDIV VPKVGMEFDE VEEVYEFYRK YAAATGFGCK 60 TRSSKKDKGI LRHVTYTCVR NGNHKTTSTT PFELDPTGKC ECKAKLSAIL GVNLKWRITV 120 FVPEHTHMTS PSKTRFMRCN KLIKKSVKRK ILINDKAGLE MYKNFNICAA EAGGVEYLTY 180 DEKDLRNMVA KEKRLKLGEG DATALINYFE RMQNLNEDFF YRIDLGDDGR LRNVFWADKR 240 CREAYKEFGE VVTFDTTYLT NKYAMPFAPF VGVNHHGQST LFGCGLISNE EIDTFVWLFQ 300 AWLDCMKGSA PQAILTDQCS SMKAAVERVF PHAKHRWCLW HIMKKIPEKL SSHKKYQNIK 360 CRLKRAVYDT TSPTEFDQSW SEMLEKYPKL RSSRWLNTLY TEKHHWVPCY VNTTFWAGMS 420 TTQRSESMNA FFDGYVHSRT TLSEFVEQYD NALRSKVEKE LKADARSFSK VIPTTTSYEI 480 EEQMQNVYTI EKFQEIQKEL TKKIYCEIID VQDEIQDGIQ VTRYDVQEEI WYYRLPFVED 540 EDGNSTDEDA TAAAGSDQED IVEVNNIPTV EEGEEDEHNP KAKKVMKHAV FKVWRWRKDV 600 KLAHSKVSLS SDSWQLTPEE KRYKELCDYF AELADIASRD DDECNDIKKW IGEQLKLVTE 660 KVPNTAKEVI HTEVNNVIEV QNPRVVPTKG RPCKNTSKPK VLQEVPTQQN IMSTVQTRNI 720 NPIHEQYHQY QLHTVGQFQN TQNMQFGVSQ SYIGGYSGVP HISPYRQVVN VAPQQLDNIC 780 YAPTYGGFQL HEGAQEANVY HLASYPEHR

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MDNDVGSKEN DFGLVETPNE DGRNRKCDIV VPKVGMEFDE VEEVYEFYRK YAAATGFGCK  60
TRSSKKDKGI LRHVTYTCVR NGNHKTTSTT PFELDPTGKC ECKAKLSAIL GVNLKWRITV  120
FVPEHTHMTS PSKTRFMRCN KLIKKSVKRK ILINDKAGLE MYKNFNICAA EAGGVEYLTY  180
DEKDLRNMVA KEKRLKLGEG DATALINYFE RMQNLNEDFF YRIDLGDDGR LRNVFWADKR  240
CREAYKEFGE VVTFDTTYLT NKYAMPFAPF VGVNHHGQST LFGCGLISNE EIDTFVWLFQ  300
AWLDCMKGSA PQAILTDQCS SMKAAVERVF PHAKHRWCLW HIMKKIPEKL SSHKKYQNIK  360
CRLKRAVYDT TSPTEFDQSW SEMLEKYPKL RSSRWLNTLY TEKHHWVPCY VNTTFWAGMS  420
TTQRSESMNA FFDGYVHSRT TLSEFVEQYD NALRSKVEKE LKADARSFSK VIPTTTSYEI  480
EEQMQNVYTI EKFQEIQKEL TKKIYCEIID VQDEIQDGIQ VTRYDVQEEI WYYRLPFVED  540
EDGNSTDEDA TAAAGSDQED IVEVNNIPTV EEGEEDEHNP KAKKVMKHAV FKVWRWRKDV  600
KLAHSKVSLS SDSWQLTPEE KRYKELCDYF AELADIASRD DDECNDIKKW IGEQLKLVTE  660
KVPNTAKEVI HTEVNNVIEV QNPRVVPTKG RPCKNTSKPK VLQEVPTQQN IMSTVQTRNI  720
NPIHEQYHQY QLHTVGQFQN TQNMQFGVSQ SYIGGYSGVP HISPYRQVVN VAPQQLDNIC  780
YAPTYGGFQL HEGAQEANVY HLASYPEHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-95	FAR1 family protein