PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026419324.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 223aa MW: 25413.7 Da PI: 6.0872 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 205.7 | 1.8e-63 | 8 | 164 | 4 | 167 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 + e++CyvqC+fCntil+vsvP +sl+kvvtvrCGhCt llsvn++ as + + + + +s+ +e+++e ++e+++l++ ek++ + XP_026419324.1 8 LELQEKICYVQCGFCNTILLVSVPCSSLSKVVTVRCGHCTCLLSVNMMRASFV-PLQ--FLTSIDDEQKQEVRHEDMELQKAPEKQSPPLLVLCE 99 67889*****************************************9887754.222..234566677777777777777666666555544443 PP YABBY 99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkih 167 +++e+e++p +p +++PPekrqr+Psaynrfikeeiqr+k P+++h+eafs+aaknWahfP++ XP_026419324.1 100 ---NDEEEENLP-TPIINKPPEKRQRAPSAYNRFIKEEIQRLKVVEPNMTHKEAFSTAAKNWAHFPRLQ 164 ...344445555.6779*************************************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 223 aa Download sequence |
MSACNNLLEL QEKICYVQCG FCNTILLVSV PCSSLSKVVT VRCGHCTCLL SVNMMRASFV 60 PLQFLTSIDD EQKQEVRHED MELQKAPEKQ SPPLLVLCEN DEEEENLPTP IINKPPEKRQ 120 RAPSAYNRFI KEEIQRLKVV EPNMTHKEAF STAAKNWAHF PRLQHRENGE SCSAFGRENV 180 TTNSDVYEVD ALHAQDKGFH GRTTIPWSQS AWTENHFGYS NQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G23420.1 | 3e-58 | YABBY family protein |