PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026419234.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 902aa MW: 102058 Da PI: 8.7642

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026419234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.4	1.2e-18	89	176	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++YneYA+++GF+vr+ +++ + + ++i ++ +vCs+eg+ + +k r++r+++r +C a +++k+++ +k+ +++++ eH+Hel XP_026419234.1 89 DYYNEYARKIGFRVRILRTNAKkGQRDKIHRQVLVCSCEGSYKMVRKP----RKRRETKRFECMAVFEIKLMSgGDKYALIRFKAEHTHELG 176 69***********987776635666799999*****998877....999**************99*************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 902 aa Download sequence
MDSHSENSAS LNCTLNAASK VHGTDNDEEE RPITEETPIS MDSSETIPDL DSNDDKGDSA 60 EAELHFCDLD ELVEPKVGMI FDTAKEALDY YNEYARKIGF RVRILRTNAK KGQRDKIHRQ 120 VLVCSCEGSY KMVRKPRKRR ETKRFECMAV FEIKLMSGGD KYALIRFKAE HTHELGPTKF 180 SRHLKTPAHV PHADSSLPRG VKAADIPEEV GLSDPNSRSG FLKRGDAHFL LEYFRQKKQE 240 NKHFFYSFRT DGDGNICGVF YCDAKSRRDY GLFGDAVCFD TTFKTNDMVC VPVIGINNHG 300 QPALFGCGLL DGETADSAVW LFTTFLEAMG GKKPISVFTS ESAFISNAVS AVFPEAHHGL 360 CLWHLFQNAS KHLTEVFKAS KSFSVQFKSC IYDPETLQEF EESWSKLLDE YGLRGIAWLQ 420 GLYELRKMWA QSRGHFCAGM TATGRSENIS KFLKAYFSTG SIPLRELVDQ YSKAMVDQYG 480 KENEAEKRTH QTEPNLISAW PIEREASKLY TREMFYGFQE ELQQIIDLLL ELVSDDGIIR 540 TYRATEMEGQ KKIRTLIYNH TEQSVYCSCK KFEFNGILCS HALKLFRNLQ YKTLPPKYYL 600 KRWTRKATED DVFDPSGELI PNNSDPSSTA RYDALLQISQ RIATKCSKSE EVFSLTNLIL 660 QEVEAKMEGR NTKEEQRPTV QKTTIETTPA VQKTTIETTP AVQKTTIETT PAVQKTTIET 720 TLAVQKTNIE TTLAVQETKI ETTPAVQKTT IKTTPAVQET TIKTTPAVQK TTIKTTPAVR 780 KTTIKTTPTV RKTTIKTTPT VRKTTIKTTP AVKKTTTRTN PAVKKTTTKT NRNQASGLLQ 840 VQQQANHSQT GWQWMNQRAV PPLRAIQPLQ VVYPQGVYPR DILPPYNSVT CQQRRPLFAP 900 QQ

Sequence ? help Back to Top

Protein Sequence Length: 902 aa Download sequence

MDSHSENSAS LNCTLNAASK VHGTDNDEEE RPITEETPIS MDSSETIPDL DSNDDKGDSA  60
EAELHFCDLD ELVEPKVGMI FDTAKEALDY YNEYARKIGF RVRILRTNAK KGQRDKIHRQ  120
VLVCSCEGSY KMVRKPRKRR ETKRFECMAV FEIKLMSGGD KYALIRFKAE HTHELGPTKF  180
SRHLKTPAHV PHADSSLPRG VKAADIPEEV GLSDPNSRSG FLKRGDAHFL LEYFRQKKQE  240
NKHFFYSFRT DGDGNICGVF YCDAKSRRDY GLFGDAVCFD TTFKTNDMVC VPVIGINNHG  300
QPALFGCGLL DGETADSAVW LFTTFLEAMG GKKPISVFTS ESAFISNAVS AVFPEAHHGL  360
CLWHLFQNAS KHLTEVFKAS KSFSVQFKSC IYDPETLQEF EESWSKLLDE YGLRGIAWLQ  420
GLYELRKMWA QSRGHFCAGM TATGRSENIS KFLKAYFSTG SIPLRELVDQ YSKAMVDQYG  480
KENEAEKRTH QTEPNLISAW PIEREASKLY TREMFYGFQE ELQQIIDLLL ELVSDDGIIR  540
TYRATEMEGQ KKIRTLIYNH TEQSVYCSCK KFEFNGILCS HALKLFRNLQ YKTLPPKYYL  600
KRWTRKATED DVFDPSGELI PNNSDPSSTA RYDALLQISQ RIATKCSKSE EVFSLTNLIL  660
QEVEAKMEGR NTKEEQRPTV QKTTIETTPA VQKTTIETTP AVQKTTIETT PAVQKTTIET  720
TLAVQKTNIE TTLAVQETKI ETTPAVQKTT IKTTPAVQET TIKTTPAVQK TTIKTTPAVR  780
KTTIKTTPTV RKTTIKTTPT VRKTTIKTTP AVKKTTTRTN PAVKKTTTKT NRNQASGLLQ  840
VQQQANHSQT GWQWMNQRAV PPLRAIQPLQ VVYPQGVYPR DILPPYNSVT CQQRRPLFAP  900
QQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	141	RKPRKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-108	FAR1 family protein