PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026419107.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 237aa MW: 27003.8 Da PI: 10.2175 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.5 | 5.5e-06 | 94 | 116 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_026419107.1 94 FVCEICNKGFQRDQNLQLHRRGH 116 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.4 | 0.00023 | 170 | 192 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_026419107.1 170 WKCDKCSKKYAVQSDWKAHSKTC 192 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MSNISGDSGS FSSGNTTQEA VAQQHLYDQQ QLQDHLTHDG SSNSITTTMV NSNISPPLQL 60 PSVLKKKRSL PGNPDPSAEV IALSPTTLMA TNRFVCEICN KGFQRDQNLQ LHRRGHNLPW 120 KLKQRSTTEI RKRVYICPEP SCVHHNPARA LGDLTGIKKH FRRKHGEKKW KCDKCSKKYA 180 VQSDWKAHSK TCGTREYKRD FRWTAPLIYI LQSFFICLSV KLVVNTNCQS YTYAIRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03840.1 | 5e-79 | C2H2 family protein |