PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026419011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 277aa MW: 32144.1 Da PI: 8.4599 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.3 | 1.8e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++nrqvtfskRr g+lKKA+EL vLCda+ +iifss+gk++eyss XP_026419011.1 10 RIENSTNRQVTFSKRRGGLLKKAHELAVLCDAQLGLIIFSSSGKMFEYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 78.1 | 2.2e-26 | 71 | 168 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk+sg++ +e ++++ +e++++k+e+++Lq + R+ GedL++L + +L+qLe qLe+s++k+R++Kn+ll +q+++l++ke+ l++++++L XP_026419011.1 71 YQKTSGVRIQEYDNQQIFTEMTRMKRETDKLQANMRRHTGEDLNDLRYDDLEQLELQLENSVNKVRARKNQLLQQQLDNLRRKEQILEQQHNYLC 165 8999*****************************************************************************************98 PP K-box 96 kkl 98 + l XP_026419011.1 166 RYL 168 765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MGRGKIEIRR IENSTNRQVT FSKRRGGLLK KAHELAVLCD AQLGLIIFSS SGKMFEYSSP 60 PSNMRQIIER YQKTSGVRIQ EYDNQQIFTE MTRMKRETDK LQANMRRHTG EDLNDLRYDD 120 LEQLELQLEN SVNKVRARKN QLLQQQLDNL RRKEQILEQQ HNYLCRYLEQ QASMEEHHRP 180 QSLLLEPKLS LSGEEQSAVA TATGGATTFD HVAMQPYYPA YQVDQGCSSS SRHNSRSSLE 240 FSSLLHHQLH PYRLQPTQPN LQEVVTADQL QHHGLQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 2e-42 | MIKC_MADS family protein |