PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418573.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 417aa MW: 44065.6 Da PI: 9.2211

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	138	2.7e-43	104	181	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls++k y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+q+ XP_026418573.1 104 RCQVEGCKLDLSDIKAYYSRHKVCAMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 181 6**************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MDIVGSGSNN NFGVSSSSSS SKGGGAAGAG GGAGVTAVSS DSSSLNGLKF GKKIYFEDVG 60 IGVSAKSVAG STSICVPDGI PLSPPTPATS RNRRNVVQGG QPPRCQVEGC KLDLSDIKAY 120 YSRHKVCAMH SKSPKVIVAG LEQRFCQQCS RFHQLPEFDQ GKRSCRRRLA GHNERRRKPQ 180 PGSLLSSRYG RLSASLQDSS RGGGFVMDFA AYPRMSGRDG WTTSRTSADQ PSATGKFLAL 240 QYPPANVFYQ GSHTYMQGSS AAGGSVFSSS RIPPGECFAG VSDSGCALSL LSNQSWDPRN 300 NQASSSVSVN NLMNGEGAPM VSQSTAPNQG AVSNSYTVSS WAFKGNDEGG GRGNSHEVHH 360 HDLGLGQVTS QPMNANHQFS GGELELAHHA VENRQYMELA HSRAYDTSSV QQMHWSL

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MDIVGSGSNN NFGVSSSSSS SKGGGAAGAG GGAGVTAVSS DSSSLNGLKF GKKIYFEDVG  60
IGVSAKSVAG STSICVPDGI PLSPPTPATS RNRRNVVQGG QPPRCQVEGC KLDLSDIKAY  120
YSRHKVCAMH SKSPKVIVAG LEQRFCQQCS RFHQLPEFDQ GKRSCRRRLA GHNERRRKPQ  180
PGSLLSSRYG RLSASLQDSS RGGGFVMDFA AYPRMSGRDG WTTSRTSADQ PSATGKFLAL  240
QYPPANVFYQ GSHTYMQGSS AAGGSVFSSS RIPPGECFAG VSDSGCALSL LSNQSWDPRN  300
NQASSSVSVN NLMNGEGAPM VSQSTAPNQG AVSNSYTVSS WAFKGNDEGG GRGNSHEVHH  360
HDLGLGQVTS QPMNANHQFS GGELELAHHA VENRQYMELA HSRAYDTSSV QQMHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	3e-55	SBP family protein