PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417812.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 380aa MW: 43801.4 Da PI: 9.6607

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	136	158	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cg+ F +++ L +H + H XP_026417812.1 136 FACQVCGRKFHTNDKLFNHFKIH 158 78*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MIEFLRFSFL FSALRSNKIS PCKHTYLPLV KFSHSIPNSG YNSVGKCTLL KSKIDVKKVA 60 VFWDLDNKPF KSFSPLDVAS RLKKMASSFG YVRYKVAYAN LYALSYMPSA VQELRKERKI 120 LNQLESSGVI NPLVPFACQV CGRKFHTNDK LFNHFKIHMR EQVKRLNRLE SSRGSRRIKL 180 DGKLSMKMEK YKNAARDVLT PKVGYGLVDE LKRAGFWVQF VSDKPQAANT VLREHMVEMM 240 HRKHADCVVL VSDDPDFVDV LREARQRGLT TVVVGDSKDG SLKRCADVEF SWQEIMLGKA 300 KKEAVSVMGR WKDQHVPERL EWTYKPESKE DESDIDKFEF ENKDGDVESE VFGAHIQNEI 360 TKPWWELDSD VEDPPAKSFK

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MIEFLRFSFL FSALRSNKIS PCKHTYLPLV KFSHSIPNSG YNSVGKCTLL KSKIDVKKVA  60
VFWDLDNKPF KSFSPLDVAS RLKKMASSFG YVRYKVAYAN LYALSYMPSA VQELRKERKI  120
LNQLESSGVI NPLVPFACQV CGRKFHTNDK LFNHFKIHMR EQVKRLNRLE SSRGSRRIKL  180
DGKLSMKMEK YKNAARDVLT PKVGYGLVDE LKRAGFWVQF VSDKPQAANT VLREHMVEMM  240
HRKHADCVVL VSDDPDFVDV LREARQRGLT TVVVGDSKDG SLKRCADVEF SWQEIMLGKA  300
KKEAVSVMGR WKDQHVPERL EWTYKPESKE DESDIDKFEF ENKDGDVESE VFGAHIQNEI  360
TKPWWELDSD VEDPPAKSFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12240.1	1e-117	C2H2 family protein