PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026417630.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 282aa    MW: 30067.8 Da    PI: 4.7115
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026417630.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.00027258280223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+k F + s L+ H +  H
  XP_026417630.1 258 SCNSCSKAFGTDSALQAHSKAkH 280
                     6*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MEFWGVEVKP GQSYKVAPVD EKVLHLSQSC IGEVKKGKEE TVVVYAKIDN QKHVIAHLSA  60
DKFPQISHDL VFEKEFELSH SSKNGSIYFT GYMSVLGDES NLLTDSDEDD MLVEDFPVDI  120
KENGKAAKPD ASAAKKVKVV DPKADDEDDS DESDSDGSDS DEDEDMEGSD SDDGESSDEE  180
EEPTPTPKGK KRPAEGASKK STPGDKKAKV ETPQKSGADG KKGGAVHQGT PYPKGGKTPA  240
SGGNNKSNKS PKSTGSVSCN SCSKAFGTDS ALQAHSKAKH VK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.23e-21C2H2 family protein