PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026417394.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 203aa MW: 22708.8 Da PI: 9.6014 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.6 | 2.2e-05 | 41 | 63 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + Cp+C+++F ++ L H++ H XP_026417394.1 41 HICPYCSRTFETSQALGGHQNAH 63 68******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MQTNTTCKFS SNNNPTRISS GSSPKTNEKI TTMMQMNDMP HICPYCSRTF ETSQALGGHQ 60 NAHRREREAD RREYLANKRA TSSNRMLTRL AAIHNASGKL LSMTPHASYV RGGNEYVYGS 120 KQLGFQSLTN EVRLLPCERC HKFLYQQVLQ QGTPPPAQPV KPVEYEFIPI KGKNILGVGE 180 KDSNGGEEVD VSSKKCLDLT LKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06650.1 | 3e-06 | C2H2 family protein |