PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026417337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 348aa MW: 39401.6 Da PI: 7.5744 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.8 | 0.00018 | 64 | 86 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H XP_026417337.1 64 YSCNFCRREFRSAQALGGHMNVH 86 99*******************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 348 aa Download sequence |
MEETRYWMWT RSKLGETTPQ VLHTRSSHVH FPTTTTEPSW EEQAFAEDSA GLLLGGCVWP 60 PRSYSCNFCR REFRSAQALG GHMNVHRRDR ARLKQSSPTS PHQHHQTSNM NGNIRPHQAI 120 NHELIQHHQN PKSHVENSSH HHPDHQIHRS SLAFSNLDPN SYNSSFVSSS SLPLSPTHRI 180 TPAAIQSSQN NCIKQTLILP PYSTAIGNQA SNHPKGGSLF STPSDSFASR VVIISENLEE 240 EKDLNKQGKE TGLKVKQGAY NESNSSVMKT FEVSNRSWLT GSAEDGEVGR DTISRKRRRN 300 DVDDTSYLPF FVKPILDDRR HLLESNELLE LNLNQSCSKE ELDLELRL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 295 | 299 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G37740.1 | 2e-26 | C2H2 family protein |