PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026416842.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 457aa MW: 53666.2 Da PI: 9.2954

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026416842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.4	4.2e-17	45	127	1	87
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fY +Y+ ++GFs +k++ k+ ++g t+ C+kegk+++ +++ + +++rt+Ckak+ ++ + +kw+++ + leHnH XP_026416842.1 45 EFYISYSFKTGFSCKKRTCKRD-HHGALNFVTYSCTKEGKNHSVSDS---PVNLPPTQRTNCKAKISARLCEGEKWMISVFTLEHNH 127 6*************999998.8888***********99877...899999***************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MGESQSASEE FEQHNSALND DNDQGDQIVL PKLGMKFNNA DDLFEFYISY SFKTGFSCKK 60 RTCKRDHHGA LNFVTYSCTK EGKNHSVSDS PVNLPPTQRT NCKAKISARL CEGEKWMISV 120 FTLEHNHLNS PSKSRYLRGH KRINTATKKK VLVNDKAGIR MNKIYGALAV EGGGYESLPY 180 NEKTLRNMVA REKKLELGEG DATALLNHFT NMQNRDPNFF YRMDIDETGC LKNVFWADNR 240 CRESYKEFGE IFTFDTTYLT NKYEMPFAPF FGVNHHGQSI LFGCGLLSNE EKETFAWLFR 300 SWLDCMNKIA PQGIITDQYS SMKWVVERVF KDTKHRWCLW HIMKKIPEKL RRYENYLKIK 360 CRMKKVVYDT QCPAEFEQHL SDMLQKYESL KQNKWFNKLY KEKHRWVPCF VKTTFWAGMS 420 TTQRSESMNA FFDGYVHSRT SLKQFVEKFD NALRYKM

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MGESQSASEE FEQHNSALND DNDQGDQIVL PKLGMKFNNA DDLFEFYISY SFKTGFSCKK  60
RTCKRDHHGA LNFVTYSCTK EGKNHSVSDS PVNLPPTQRT NCKAKISARL CEGEKWMISV  120
FTLEHNHLNS PSKSRYLRGH KRINTATKKK VLVNDKAGIR MNKIYGALAV EGGGYESLPY  180
NEKTLRNMVA REKKLELGEG DATALLNHFT NMQNRDPNFF YRMDIDETGC LKNVFWADNR  240
CRESYKEFGE IFTFDTTYLT NKYEMPFAPF FGVNHHGQSI LFGCGLLSNE EKETFAWLFR  300
SWLDCMNKIA PQGIITDQYS SMKWVVERVF KDTKHRWCLW HIMKKIPEKL RRYENYLKIK  360
CRMKKVVYDT QCPAEFEQHL SDMLQKYESL KQNKWFNKLY KEKHRWVPCF VKTTFWAGMS  420
TTQRSESMNA FFDGYVHSRT SLKQFVEKFD NALRYKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-90	FAR1 family protein