PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026416703.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 643aa MW: 73433.2 Da PI: 6.7504

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026416703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	95.8	4e-30	150	235	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++++++++++k+plW+ev++ m +e+g++rs k+C+ek+enl k+ykk+keg+++r ++ +++++f+qlea XP_026416703.1 150 RWPRQETLTLLEIRSSLDNKFKEANQKGPLWDEVARIMaEEHGYQRSGKKCREKFENLYKYYKKTKEGKSGR--QDGKNYRFFRQLEA 235 8***********************************999*************************97..66678*****85 PP
2	trihelix	63.2	6e-20	467	554	1	86
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 rW ++e+l Li +r+ me+r+r+ g +k lWe++s+km++ g++rs++ C+ekw+ +nk+ k + +++ ++ s+++ pyf++l+ XP_026416703.1 467 RWLEDEILNLIHLRTGMESRFRQcGYPEKSLWEDISSKMASLGYNRSAEICEEKWSTVNKYITKANVVSNSTyKECSRNEGPYFQHLD 554 8*******************9789*************************************9999955666667899997 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MEMEDEYGIA DLRQMIAGRS SFPAMNQQQS ELVQFNRNRA AASTGVMPAR LGHEHYQEML 60 MFGGGGVHHH RVGVADHLHH NQNLCGGGGM MEFCAANDDS TTTTNSTTSN ITINPNNSGV 120 CVLEMMEGNV NGAVNNGVAG GGDNGGGNSR WPRQETLTLL EIRSSLDNKF KEANQKGPLW 180 DEVARIMAEE HGYQRSGKKC REKFENLYKY YKKTKEGKSG RQDGKNYRFF RQLEALYGET 240 TNSHQLSVSN TNFDGDIAGL SFQFMNNNSA STHSNQEGLL SHSHQTKFSD QSLSLSNSSD 300 FDTSSSEDNN DEDITTFSFM ENGENKNKLV KDNRCAKRGK KNWKAKIRDF VDSRMKKLME 360 TQEAWLDKVL KTLEHKERER ILREEEWRRQ ETARLDQEHK FWAKERARFE ARDAVIMEAF 420 QRMVGNEHKV SYPDQELIAT NFHETTENKN HNRTQAFRKI IVNGHNRWLE DEILNLIHLR 480 TGMESRFRQC GYPEKSLWED ISSKMASLGY NRSAEICEEK WSTVNKYITK ANVVSNSTYK 540 ECSRNEGPYF QHLDSMHHND YQGAFPKQDT HKQGPETEGV QLNDVPSPSN STAGMSTAVQ 600 DSSFRFMMTH NDQGDNSWQN YGVKLYNKGS NQINKFISPL EEI

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MEMEDEYGIA DLRQMIAGRS SFPAMNQQQS ELVQFNRNRA AASTGVMPAR LGHEHYQEML  60
MFGGGGVHHH RVGVADHLHH NQNLCGGGGM MEFCAANDDS TTTTNSTTSN ITINPNNSGV  120
CVLEMMEGNV NGAVNNGVAG GGDNGGGNSR WPRQETLTLL EIRSSLDNKF KEANQKGPLW  180
DEVARIMAEE HGYQRSGKKC REKFENLYKY YKKTKEGKSG RQDGKNYRFF RQLEALYGET  240
TNSHQLSVSN TNFDGDIAGL SFQFMNNNSA STHSNQEGLL SHSHQTKFSD QSLSLSNSSD  300
FDTSSSEDNN DEDITTFSFM ENGENKNKLV KDNRCAKRGK KNWKAKIRDF VDSRMKKLME  360
TQEAWLDKVL KTLEHKERER ILREEEWRRQ ETARLDQEHK FWAKERARFE ARDAVIMEAF  420
QRMVGNEHKV SYPDQELIAT NFHETTENKN HNRTQAFRKI IVNGHNRWLE DEILNLIHLR  480
TGMESRFRQC GYPEKSLWED ISSKMASLGY NRSAEICEEK WSTVNKYITK ANVVSNSTYK  540
ECSRNEGPYF QHLDSMHHND YQGAFPKQDT HKQGPETEGV QLNDVPSPSN STAGMSTAVQ  600
DSSFRFMMTH NDQGDNSWQN YGVKLYNKGS NQINKFISPL EEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10000.1	1e-65	Trihelix family protein