PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026416249.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 108aa MW: 12148.3 Da PI: 4.5014 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 29.1 | 2.7e-09 | 1 | 49 | 45 | 93 |
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 ++++lpe++r da+ss+vyeA+ r+rdP + +i++++ + +q ++ XP_026416249.1 1 MVQELPESQRVDAVSSMVYEANSRIRDPDIDDFMMINAITTRHQQQQQP 49 7899*****************************9999999998888765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence |
MVQELPESQR VDAVSSMVYE ANSRIRDPDI DDFMMINAIT TRHQQQQQPT TNTIFPTSSS 60 LSSLQQDIDD IMSNKIITQS SSPDNNFHGS IFGHANMGLE WNHPCGHN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 8e-10 | LBD family protein |