PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026416248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 219aa MW: 24163.3 Da PI: 5.2138 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 131.6 | 3.3e-41 | 29 | 128 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+C ++C lapyfp ++p kf +h++FGasn++k+l++lpe++r da+ss+vyeA+ r+rdPvyG++g+i +l++q++ l+a+la XP_026416248.1 29 PCAACKILRRRCGEKCLLAPYFPPTEPLKFTTAHRVFGASNITKMLQELPESQRVDAVSSMVYEANSRMRDPVYGCAGTICQLHKQVSDLQAQLA 123 7********************************************************************************************** PP DUF260 96 llkee 100 + ++e XP_026416248.1 124 KSQAE 128 99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MGSSTDTSIA TNIPTPSSAP SLPQVVITPC AACKILRRRC GEKCLLAPYF PPTEPLKFTT 60 AHRVFGASNI TKMLQELPES QRVDAVSSMV YEANSRMRDP VYGCAGTICQ LHKQVSDLQA 120 QLAKSQAEIV NMRCQQAHFV GLLCMEMKQH SQYQQQQQQQ PTTSTISPTS SLSSLQLQED 180 IDDYMVNNTI SNQSSSPDNN FDGLIFGDAN LGSEWEPLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 4e-64 | LBD family protein |