PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026416141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 236aa MW: 27501.1 Da PI: 9.1062 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.4 | 2.2e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev +iifsstgklye+ss XP_026416141.1 10 RIDNTTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGKLYEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 76.1 | 9.3e-26 | 82 | 170 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++++a+ +++e+a L+ +++nLq+++R+l+G++L+sLs keLq+Le+qLe sl+ +R +K++ l+++i++l +k + l++en++L +k XP_026416141.1 82 NATSEAKLWKREAATLRHQLQNLQENHRQLMGQELSSLSTKELQNLENQLEMSLRGVRMQKDQKLTDEIHKLSQKGNLLHQENMELFRK 170 67788999******************************************************************************887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGRGKIVIRR IDNTTSRQVT FSKRRNGLLK KAKELSILCD AEVGLIIFSS TGKLYEFSST 60 NMKSIIERYN TSKEDQHHPL MNATSEAKLW KREAATLRHQ LQNLQENHRQ LMGQELSSLS 120 TKELQNLENQ LEMSLRGVRM QKDQKLTDEI HKLSQKGNLL HQENMELFRK EHHIRQENMD 180 LLKKINEARD AHETNRVSHS PNGFNLEEED DECIMLQLSQ PQQQNYATPQ NPTTLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 8e-94 | MIKC_MADS family protein |