PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415996.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 445aa MW: 49549.1 Da PI: 8.6057

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415996.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00062	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H XP_026415996.1 53 YECKTCDKRFPSFQALGGHRASH 75 99**********99999998887 PP
2	zf-C2H2	10.9	0.0015	278	300	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F++ L H +H XP_026415996.1 278 YECKTCNKQFPSFQALGGHRASH 300 99**********99999988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MMSNKRSRGE MEESMAATMA KCLMLLSRDR GDIDYQSVIQ QHKMPSSTQG RIYECKTCDK 60 RFPSFQALGG HRASHRKPRL MELYSSDDQS INDDQQQGKK QKVHECSICG LTFAIGQALG 120 GHMRKHRAAM IESSSTTATA ETTSTGLSSS SSSDFTHITL QQEVVPEVPV LKRSNSSRRV 180 LSLNLDLSLS LLPLDNTGFE FSTTVNADKH MPSTPSMIYS FFQRDMMSNK RNGGEMEKSM 240 TATMVKYLSL LSHDNGDIDY DSVIQKQRMP TSIQGRIYEC KTCNKQFPSF QALGGHRASH 300 KKPRLMELYS LDNQSISDNQ QQAKKQKVHE CSICGSKFAI GQALGGHMRR HRAAMNECSS 360 TIAAATTTGL SSSSSDNTDI SFQEDVLPQV PVLKRSNSCR RVSSLNLDLS LALLPLDSNN 420 EFEFSTIEKA DRHMPSTPLM VYSFV

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MMSNKRSRGE MEESMAATMA KCLMLLSRDR GDIDYQSVIQ QHKMPSSTQG RIYECKTCDK  60
RFPSFQALGG HRASHRKPRL MELYSSDDQS INDDQQQGKK QKVHECSICG LTFAIGQALG  120
GHMRKHRAAM IESSSTTATA ETTSTGLSSS SSSDFTHITL QQEVVPEVPV LKRSNSSRRV  180
LSLNLDLSLS LLPLDNTGFE FSTTVNADKH MPSTPSMIYS FFQRDMMSNK RNGGEMEKSM  240
TATMVKYLSL LSHDNGDIDY DSVIQKQRMP TSIQGRIYEC KTCNKQFPSF QALGGHRASH  300
KKPRLMELYS LDNQSISDNQ QQAKKQKVHE CSICGSKFAI GQALGGHMRR HRAAMNECSS  360
TIAAATTTGL SSSSSDNTDI SFQEDVLPQV PVLKRSNSCR RVSSLNLDLS LALLPLDSNN  420
EFEFSTIEKA DRHMPSTPLM VYSFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53600.1	6e-27	C2H2 family protein