PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026415883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 321aa MW: 35093.1 Da PI: 6.1266 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.7 | 0.00082 | 65 | 87 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H XP_026415883.1 65 YTCSFCAREFRSAQALGGHMNVH 87 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
METGSGAIME DAAKYWMWMN SKPVGDVRAI SNNVIVGEAN NWEERAFAVD SAGPLGGFIW 60 PPRSYTCSFC AREFRSAQAL GGHMNVHRRD RARLKESDHL PIDHYNPNNN NIHRAVVYNS 120 DHSIVSLLPL SSTQEIIDIN GAAGKTILLV SPSYAWSPTV VHENNYAQVK EAAGSKLLLL 180 DLPQTADPVL ARVRSTSSSS SSSTLVCQSA SKLEEEKSSS KAHEIEVLDD DTAKDNIIEA 240 VSLSSNIDSN RPTGFSNNHH VSTMGNKRRR RDVQVLPSLS LSLLLPTDGT AGSTSTIFDN 300 VNGILHRSNP SMDELDLELR L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37740.1 | 4e-26 | C2H2 family protein |