PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026415850.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARR-B
Protein Properties Length: 356aa    MW: 40371 Da    PI: 7.5235
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026415850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like61.71.5e-19162214255
         G2-like   2 prlrWt.peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +r+ W+ peLH++Fvea ++LG  ++AtP++i   m+v+gLt+ +v+SHLQ+YR+
  XP_026415850.1 162 TRVSWAdPELHTKFVEAYHKLG--DEATPSRIISEMNVPGLTRLQVASHLQRYRM 214
                     7999*758*************4..77****************************7 PP
2Myb_DNA-binding32.12.6e-10169213648
                      HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   6 teEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 
                      +e++ ++v+a ++lG + t+++I ++m+  g+t+ q+ s++q y+
   XP_026415850.1 169 PELHTKFVEAYHKLGDEaTPSRIISEMNvPGLTRLQVASHLQRYR 213
                      8**************99**************************97 PP
3Response_reg55.33.7e-19141201107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vd++ + +++++ +l++ +y +v++a+++e al++l++++  +D++++D e  +m+G++ll+ i  e  ++p++++   ++ e++ ++++ G
  XP_026415850.1  14 VLAVDESFVCLKNIEILLKECRY-QVTAATSAEFALDILRKNKenFDIVITDTETGEMNGFRLLEIICLEM-DIPVLMMCKGNDRETLMKCIDHG 106
                     7899*******************.***************888778**********************8865.9********************** PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a +fl+Kp  p+++
  XP_026415850.1 107 ACGFLMKPPIPKDI 120
                     ********655555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MESISYMFPQ GLRVLAVDES FVCLKNIEIL LKECRYQVTA ATSAEFALDI LRKNKENFDI  60
VITDTETGEM NGFRLLEIIC LEMDIPVLMM CKGNDRETLM KCIDHGACGF LMKPPIPKDI  120
QNIWHYVFKH KINKSTLSNL DIQKNETERN CNRNEEASGQ RTRVSWADPE LHTKFVEAYH  180
KLGDEATPSR IISEMNVPGL TRLQVASHLQ RYRMILGEQS QKSESITTSI GMSGSGHLRI  240
RSLRNLEFKN RMDYLSRLKS YHSGMSQSSH DGVTPNASIH SIINPQPQFL PSTQRYTSQF  300
FSAPGDYNSA EDDLSAVNRP WIPCFNGNNA VRTSNISTGY KAAFTMKLLS PQLDVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.14e-49ARR-B family protein