PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415610.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 813aa MW: 93479.5 Da PI: 6.9604

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.1	1.6e-19	94	181	1	91
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++YneYA+++GF+vr+ +++ + ++ ++i ++ +vCs+eg+ + +k r++r+++r +C a +++k+++ +k+ +++++ eH+Hel p XP_026415610.1 94 DYYNEYARKIGFRVRILRTNMNrSKRDKIHRQVLVCSCEGTYRMVRKP----RKRRESKRFECMAVFEIKLMSGDKYALIRFKAEHTHELIP 181 69***********87766553445559999******998877....999********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 813 aa Download sequence
MDSQSENPNN KIIVSSSLHC TLNGNPEIYE TDDEGDPIPE ETPITDDNCE TIPDLDSNDN 60 ENTAEVVEQR FCDSDELVEP KVGMIFDTAK EAFDYYNEYA RKIGFRVRIL RTNMNRSKRD 120 KIHRQVLVCS CEGTYRMVRK PRKRRESKRF ECMAVFEIKL MSGDKYALIR FKAEHTHELI 180 PPKFSSYLKT PKRIESAHIA HVDSSPPRGI KAADVFSYIP EEVGLSDPNT KSGFFKRGDA 240 HFLLEYFRKK KQENKHFFYS FRTNGDGNIC GVFFCDAKSR RDYGLFGDAV SFDTTFKTNN 300 YDMICAPVIG INNHGQPILF GCGLLDVETT DSVVWLFTTF LEAMGGKKPI SVFTDQSAFI 360 SNAVSVVFPE AQHGLCLWHI LQNASKHLTK VFKAFKSFSV QFRACIYDPE TIEEFEESWS 420 KLLDEYGLRG IEWLQGLYDL RQMWAQVYSS GHFCAGMTAT ERSENISKFL KAYFSTGSIL 480 LREFVDQYSK AMVDRYEKEK EAEKKTHQTA PNLISAWSVE REASNLYTRE MFYGFQEGLQ 540 QTIDLLLELV SDDGVIRTYK ATEMEGQKKI RTLTYNQAEQ SVYCSCRKFE FNGILCSHAL 600 KLFRDLRFKN LPPKYYLKRW TRKATEEDVF DPSGELIPND NDPSSTARYN ALLQISQRIV 660 TKGSKSEEVF SLTNALLLEL EAKMEGRNTR EEPRPTTKKT TIDTNQNQVS DLAPTQIIRG 720 GRTSAVQKAT TDTNQNQEAS RLLQVQQPQP NYSQTGWQWM NQRVVHPQGV HPRDILPPYN 780 SMPSQQRRPY LQNSLFAPQQ ESPSQIKPRE MPR

Sequence ? help Back to Top

Protein Sequence Length: 813 aa Download sequence

MDSQSENPNN KIIVSSSLHC TLNGNPEIYE TDDEGDPIPE ETPITDDNCE TIPDLDSNDN  60
ENTAEVVEQR FCDSDELVEP KVGMIFDTAK EAFDYYNEYA RKIGFRVRIL RTNMNRSKRD  120
KIHRQVLVCS CEGTYRMVRK PRKRRESKRF ECMAVFEIKL MSGDKYALIR FKAEHTHELI  180
PPKFSSYLKT PKRIESAHIA HVDSSPPRGI KAADVFSYIP EEVGLSDPNT KSGFFKRGDA  240
HFLLEYFRKK KQENKHFFYS FRTNGDGNIC GVFFCDAKSR RDYGLFGDAV SFDTTFKTNN  300
YDMICAPVIG INNHGQPILF GCGLLDVETT DSVVWLFTTF LEAMGGKKPI SVFTDQSAFI  360
SNAVSVVFPE AQHGLCLWHI LQNASKHLTK VFKAFKSFSV QFRACIYDPE TIEEFEESWS  420
KLLDEYGLRG IEWLQGLYDL RQMWAQVYSS GHFCAGMTAT ERSENISKFL KAYFSTGSIL  480
LREFVDQYSK AMVDRYEKEK EAEKKTHQTA PNLISAWSVE REASNLYTRE MFYGFQEGLQ  540
QTIDLLLELV SDDGVIRTYK ATEMEGQKKI RTLTYNQAEQ SVYCSCRKFE FNGILCSHAL  600
KLFRDLRFKN LPPKYYLKRW TRKATEEDVF DPSGELIPND NDPSSTARYN ALLQISQRIV  660
TKGSKSEEVF SLTNALLLEL EAKMEGRNTR EEPRPTTKKT TIDTNQNQVS DLAPTQIIRG  720
GRTSAVQKAT TDTNQNQEAS RLLQVQQPQP NYSQTGWQWM NQRVVHPQGV HPRDILPPYN  780
SMPSQQRRPY LQNSLFAPQQ ESPSQIKPRE MPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	146	RKPRKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-124	FAR1 family protein