PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415608.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 518aa MW: 56819.7 Da PI: 7.9127

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.5	2.6e-16	132	220	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + L++a+ ++ +l+rg+l++ +Weev+ ++ +++ +s +qCk+k +nl+kryk + ++++ + +++s++p+f+++e XP_026415608.1 132 EWSDTAIGSLLDAYMDKFVQLNRGNLRGRDWEEVATVVsvrcDKQKGGKSVEQCKNKVDNLKKRYKVELNRMNH-SGTNVSHWPWFKKIE 220 5*********************************9999887778889*************87666664.4677889****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MASCDDDFSL LGDETQTPPP PTHHHHHNNE DYSEAGFGNN NAFGDENESN PFGEEESDPN 60 KSRGNSRSEK RKEQEELSDG GTTTPYSCKK PKSTTPNTNT PPPNNTTTIT ISTSSVGMDY 120 RYRGEYRKDR EEWSDTAIGS LLDAYMDKFV QLNRGNLRGR DWEEVATVVS VRCDKQKGGK 180 SVEQCKNKVD NLKKRYKVEL NRMNHSGTNV SHWPWFKKIE QIIGTSSTSS KGVSDEDKSP 240 GSSASMLRQQ PKRYAIIAPR PAGMVNSMNP KSLSTPRWRR VVFKISGAAL AGTGPQNIDP 300 KVVMLIAREV ATACRNGVEV AIVLGGRNFF CGDTWVGATG LERSVAYQIG MMATVMNSVL 360 LQSAIEKQGI QTRVQTAFPM NEVAEPYCKR RAIRHLEKGR VVIFGGVGAG SGNPLFTTDT 420 AAALRASEMN AEALLKGTNI DGVYDCQSRN NTSTAFEHVS YRELVSRGVT SMDMMAITFC 480 EENGIPVVVF NLLEPGNISK ALCGDKVGTL IDQSGRMS

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MASCDDDFSL LGDETQTPPP PTHHHHHNNE DYSEAGFGNN NAFGDENESN PFGEEESDPN  60
KSRGNSRSEK RKEQEELSDG GTTTPYSCKK PKSTTPNTNT PPPNNTTTIT ISTSSVGMDY  120
RYRGEYRKDR EEWSDTAIGS LLDAYMDKFV QLNRGNLRGR DWEEVATVVS VRCDKQKGGK  180
SVEQCKNKVD NLKKRYKVEL NRMNHSGTNV SHWPWFKKIE QIIGTSSTSS KGVSDEDKSP  240
GSSASMLRQQ PKRYAIIAPR PAGMVNSMNP KSLSTPRWRR VVFKISGAAL AGTGPQNIDP  300
KVVMLIAREV ATACRNGVEV AIVLGGRNFF CGDTWVGATG LERSVAYQIG MMATVMNSVL  360
LQSAIEKQGI QTRVQTAFPM NEVAEPYCKR RAIRHLEKGR VVIFGGVGAG SGNPLFTTDT  420
AAALRASEMN AEALLKGTNI DGVYDCQSRN NTSTAFEHVS YRELVSRGVT SMDMMAITFC  480
EENGIPVVVF NLLEPGNISK ALCGDKVGTL IDQSGRMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein