PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415580.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 495aa MW: 56139.2 Da PI: 6.4202

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73.2	4.5e-23	119	223	1	86
trihelix 1 rWtkqevlaLiearremeerlrr.gk.................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsess 76 +Wt+++v++Li ++ +++++ + g+ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++ XP_026415580.1 119 KWTDNMVRLLIMVVYYVGDDAGPeGNdltggggnckkksggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDIIGKGtACRVV 213 7************9999988524477788888999999999********************************************559999 PP trihelix 77 stcpyfdqle 86 ++ ++++ l+ XP_026415580.1 214 ENPALLETLD 223 9999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MGSGMLGLEM PIHHPHHPHH QHPHPHQQQQ QQQQQQQHPF ANHLQQQPHH LVSFGVGGHE 60 ADPHNQSQQA VKQNAYGFGN KPKPPQQVAI SDEDEPGFAG EDGGGADGRK RVSPWQRVKW 120 TDNMVRLLIM VVYYVGDDAG PEGNDLTGGG GNCKKKSGGL LQKKGKWKSV SRAMMEKGFY 180 VSPQQCEDKF NDLNKRYKRV NDIIGKGTAC RVVENPALLE TLDHIPPKLK EEVKKLLNSK 240 HLFFREMCAY HNSGGGGGGG IASGGGHQIP DVAVESSQHH QQDRCFHSSQ GAAANGNSRA 300 RADLEGSKMV NKRGVSHEEE EDEDVEDEED GDEDEEEEEE EDEETEDGGK SHRMQGAGHD 360 DEDDDEKMVR KKRQRRGTFP SVSPSIQQLS CELMNVLQDG SKNPWEQRQW MRTRTVQLEE 420 QRVSYQCQAF ELEKQRLKWL KFSGKKEREL ERMKLNNERL RLENDRMVLL LRQKELELVD 480 LHQQQHSSSK PTSMN

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MGSGMLGLEM PIHHPHHPHH QHPHPHQQQQ QQQQQQQHPF ANHLQQQPHH LVSFGVGGHE  60
ADPHNQSQQA VKQNAYGFGN KPKPPQQVAI SDEDEPGFAG EDGGGADGRK RVSPWQRVKW  120
TDNMVRLLIM VVYYVGDDAG PEGNDLTGGG GNCKKKSGGL LQKKGKWKSV SRAMMEKGFY  180
VSPQQCEDKF NDLNKRYKRV NDIIGKGTAC RVVENPALLE TLDHIPPKLK EEVKKLLNSK  240
HLFFREMCAY HNSGGGGGGG IASGGGHQIP DVAVESSQHH QQDRCFHSSQ GAAANGNSRA  300
RADLEGSKMV NKRGVSHEEE EDEDVEDEED GDEDEEEEEE EDEETEDGGK SHRMQGAGHD  360
DEDDDEKMVR KKRQRRGTFP SVSPSIQQLS CELMNVLQDG SKNPWEQRQW MRTRTVQLEE  420
QRVSYQCQAF ELEKQRLKWL KFSGKKEREL ERMKLNNERL RLENDRMVLL LRQKELELVD  480
LHQQQHSSSK PTSMN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	1e-51	Trihelix family protein